Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 201 1e-46 seq162 107 2e-18 >seq2 Length=859439 Score = 201 bits (222), Expect = 1e-46 Identities = 612/931 (66%), Gaps = 21/931 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 ||||| || |||| ||||| ||| ||| |||| || || | ||| | || Sbjct 393517 TACTTCGGCTTCAAGACCCTCGAGCGCTCCTACCTTCTCCGCATCAACGGCGCCGTCGCC 393576 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || | || ||| ||||| ||||||| ||||| | ||||||||||| || ||||| || Sbjct 393577 GAGAGGCCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGGCGAGGACATCGAG 393636 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 75323 || | ||||| ||||| ||| | |||| | | ||| ||||| | || | Sbjct 393637 AAGGTGATCGAGACGTACGAGCTCATGAGCAGCAAGTTCT--TCACCCACGCTTCGCCGA 393694 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | || ||||| || ||||| || |||||| || | |||||||| |||||| | Sbjct 393695 CGCTGTTCAACGCGGGTACCCCCCAGCCGCAGCTGAGCTCGTGCTTCCTCGTCGCCATGA 393754 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||| ||| || | |||||||| | || |||| | || || ||||| ||| Sbjct 393755 AGGATGACAGTATTGAAGGTATCTACGATACCCTTAAGACCTGCGCATTGATCTCGAAGA 393814 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGG 75502 || || | ||| || | ||| |||| || | | | | |||||| ||| Sbjct 393815 CTGCCGGTG-TATCGGTCTTCACGTCCACAATATCCGTTCTACGGG--CTCGTACATCGC 393871 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 ||||| |||||| || ||||| | || || ||||| | || || ||| ||| || Sbjct 393872 GGGACCAATGGTACTTCCAATGGTCTCATCCCGATGCTGAGGGTGTTCAACAACACGGCC 393931 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCAT-CGCGGTCTACTTGGAACC 75618 | || || | || | | ||| | |||| ||| | | ||| ||||| | || || Sbjct 393932 AGGTACGTCGACCAGG-GCGGCAACAAAAGGCCCGGTGCTTTCGCAATCTACCTCGAGCC 393990 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| || || | | |||||||| || | ||| ||||| ||| | ||||||| Sbjct 393991 GTGGCACGCGGACGTGTTCGAGTTCCTCGACCTCCGAAAGAACCACGGTAAGGAAGAGGT 394050 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || || || || || | |||| ||| | || ||||| ||||||||| |||| || Sbjct 394051 CAGGGCCAGGGACCTGTTCTACGCCCTCTGGGTGCCCGACCTGTTCATGAAGAGGGTCGA 394110 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | || ||| | ||| || ||||| || || |||| | || || || || | Sbjct 394111 GCAGAACGGTGACTGGAGCCTGTTCTGCCCTAACGAGGCTACCGGCCTTTCGGATGTTTA 394170 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 || |||||||| || | |||||||| || || || || | | | ||| | Sbjct 394171 CGGCGAGGAGTTCGA-GAGCTCTACACCCGCTACGA-GAAGACCGCCGGCCTCGCGCG-C 394227 Query 75859 TGTACC----AGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 | ||| || ||| || | | || | || ||||| | | ||||| ||||| |||| Sbjct 394228 AGGACCGTCAAGGCGCAGAAGCTGGGTATGCCATTCTGGAGGCGCAGACCGAGACGGGAA 394287 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 | || || ||||| |||||||| || || ||||||||||| ||||| ||||| |||| | Sbjct 394288 CCCCGTACATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGCA 394347 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||||||||||| || || |||||||| || | |||||| | | |||||| | Sbjct 394348 CGATCAAGAGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCG-CCCCGATGAGGTAG 394406 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065 | || ||||| | || || |||||||| || Sbjct 394407 CCGTGTGCAACCTCGCGTCGATCGCCCTGCC 394437 >seq162 Length=94999 Score = 107 bits (118), Expect = 2e-18 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || || ||| | || | || || || |||||||||| | ||||| || ||| Sbjct 12551 TTCGACGCTATCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATCCGCTGG 12610 Query 65050 TTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 | || || | | || | |||| ||| |||| || | || ||||| || || || Sbjct 12611 ATCGAGGACGACGAGTC-CACCTTTGCCCAGCGTCTCGTCGCTTTTGCCGCCGTCGAAGG 12669 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168 |||||||||| || |||||| ||| || | ||| | |||||||| ||||||||||| Sbjct 12670 TATCTTCTTCAGTGGTTCATTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCC 12729 Query 65169 AGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 ||||| |||||| || || || || ||||| || |||||||||||| || ||||| Sbjct 12730 CGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACCGACTTTGC 12789 Query 65229 C 65229 | Sbjct 12790 C 12790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566527666560