Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 114 4e-20 seq266 93.3 1e-13 >seq2 Length=859439 Score = 114 bits (126), Expect = 4e-20 Identities = 368/568 (65%), Gaps = 5/568 (1%) Strand=Plus/Minus Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994 |||| | || ||||| |||||||| ||| | ||| || | ||||| ||||| || | Sbjct 394082 CCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCCTTACCGTGGTTCTTTCGGA 394023 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 | || | ||| || | || | || ||||| || || || || ||| ||| Sbjct 394022 GGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCGG 393963 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 ||| ||| || ||||| || || |||| || || || ||||| || | ||||| | Sbjct 393962 GCCTTTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATCG 393903 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | || | |||||||||||| |||||||| ||||| || | ||| || | || || | || Sbjct 393902 GGATGAGACCATTGGAAGTACCATTGGTCCCGCG-ATGTACGAGCCCGTAGAACGGATAT 393844 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 | || | || || || ||| |||| | || || || ||||| ||| | | Sbjct 393843 TGTGGACGTGAAGACCGATA-CACCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAGGG 393785 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 ||| | | |||||||||||| ||||| | ||| | | || ||||||| || | | Sbjct 393784 TATCGTAGATACCTTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCT 393725 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 | || | || || || |||||||| || || || | || || | || |||| | Sbjct 393724 GCGGCTGGGGGGTACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGC 393665 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 ||| ||||| ||||| | | |||||| | | ||||| || | | | || Sbjct 393664 TCATGAGCTCGTACGTCTCGATCACCTTCTCGATGTCCTCGCCGTGGATGCCTACGGCGA 393605 Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471 | | ||| ||| ||||| || | ||| | | | || | || || |||||||| | Sbjct 393604 CGCGCATGATCATGTGCTGCGGCCTCTCGGCGACGGCGCCGTTGATGCGGAGAAGGTAGG 393545 Query 156472 CGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| || || || || || ||||| || Sbjct 393544 AGCGCTCGAGGGTCTTGAAGCCGAAGTA 393517 Score = 107 bits (118), Expect = 6e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || || ||||| |||||||||||| |||||||| ||||| | ||||||||||| Sbjct 394388 GTACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTT 394329 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || |||| || || |||||||| || ||||| |||||||| ||||| |||| || Sbjct 394328 GCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGC 394269 Query 155750 GTCCAGAAT 155758 |||||||| Sbjct 394268 CTCCAGAAT 394260 >seq266 Length=52917 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||| ||||| |||||| |||||| | |||||||| |||||| | |||||||||| Sbjct 13995 AGAATTCCTTCAG-ACGGGGTACACCAAGCGTTACGTT---CTTGGAGGAAACACCAGCA 13940 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| || || || | ||| || | ||||| || || || || || | | Sbjct 13939 AAGTGGAAAGTGTTGAGCGTCATTTGCGTGGCAGGCTCTCCGATCGACTGAGCAGCTAGC 13880 Query 301933 ATACCAACCATTTCTCCTGGTG 301954 | || |||||||| || |||| Sbjct 13879 ACGCCGACCATTTCACCCGGTG 13858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809830642844