Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq162 156 5e-32 seq2 125 9e-23 seq306 123 3e-22 >seq162 Length=94999 Score = 156 bits (172), Expect = 5e-32 Identities = 212/293 (72%), Gaps = 17/293 (6%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | |||||| |||| |||||||||||||| || ||||| Sbjct 12772 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCACGCTT 12713 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||||| ||| || ||| ||||| || |||||||||||||| Sbjct 12712 CTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATACCTTCGACGGCGGCAAA 12653 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 ||| ||| |||| |||||||||| ||| | |||| |||||| || || Sbjct 12652 AGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTC------GATCCAGCGGATGGC 12599 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA---AGAGGTGGT 869411 |||||||||||| ||| | | |||| | || ||||| ||| |||| | ||||| Sbjct 12598 CCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGAAGAGATAGGTGCG 12539 Query 869412 CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | || ||| ||||||| |||||| ||||||||||| || ||||| ||| Sbjct 12538 CTGCTTGGGC----TCCTTGATATAGGTATCGATCAGGAGAGAGTAGGTTTCC 12490 Score = 131 bits (144), Expect = 2e-24 Identities = 183/256 (71%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || |||||| |||||||| ||| | | || | | | Sbjct 12491 CCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGATCT 12432 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| || | | ||||||||| ||||| ||||| |||||||| Sbjct 12431 GCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGCGA 12372 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | || || |||||||| |||||||| ||||||||||||| | ||| ||||| Sbjct 12371 AGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCCAGT 12312 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || || | ||| || | || ||||||||||||| ||| ||||||||||| | Sbjct 12311 CGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCAGAACGATGCCTCGGCCTTCT 12252 Query 869868 TGTACATCTCCCATAC 869883 ||||||| | |||||| Sbjct 12251 TGTACATTTGCCATAC 12236 Score = 118 bits (130), Expect = 1e-20 Identities = 214/305 (70%), Gaps = 10/305 (3%) Strand=Plus/Minus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| ||||||||||||||||||||| | | |||| ||||||| | ||| Sbjct 13067 ACACGCTTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGACTCCATGAAGTCGAAG 13008 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 ||||| | | |||||| ||| | ||||| | | | ||||||||||||||||| Sbjct 13007 GGGTTCGCAGAGTTGTAGACCTTCCTGTTGCCGAGGGCCACAAGCAGGCGGTCGGCGACG 12948 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGAC 868888 ||||||||||| || ||| || |||||| ||||| | ||| || ||| || | | Sbjct 12947 AACTCGATGTATTGCTTCATCAGCTTGGCGTTGATGCCCAAGAGAGCGCACGGGAGAGCC 12888 Query 868889 TCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCG 868948 || | | ||||| | ||| ||| |||||||| ||||||| | || | | ||| | Sbjct 12887 TCCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCAACGATGA-CAGCTTCG--ACGGCC 12831 Query 868949 GCCGAG---GGCTTGTTGACGAGCATCG-TGTAGAGCAGGCAGGCAAAGTCGCAGTGCA- 869003 || | ||| ||||| ||| || | || |||| ||||||||||||||| ||| | Sbjct 12830 TCCTTGCTCGGC-TGTTGTTGAG-ATGGCTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAG 12773 Query 869004 ACCCT 869008 ||||| Sbjct 12772 ACCCT 12768 >seq2 Length=859439 Score = 125 bits (138), Expect = 9e-23 Identities = 302/452 (67%), Gaps = 19/452 (4%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||||||||| | ||||||| ||| || || | ||||| || | ||| || || Sbjct 393949 GCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATT 393890 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| || ||||| ||||| | ||| | ||| | | || | ||||| || || Sbjct 393889 GGAAGTACCATTGGT-CCCGCGATGTACGAGCCCGTAGAACGGATATTGTGGACGTGAAG 393831 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||||| | ||||| | ||| ||||| | ||||| || || || |||||||| || Sbjct 393830 ACCGAT-ACACCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACC 393772 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || ||| |||||||| | ||||| |||||||| ||||| || | || Sbjct 393771 TTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGT 393712 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAAC-TGCCGCGACATGGCGTCGT 1630360 || |||||||| ||||| |||| || |||||| ||| ||| || |||| |||| Sbjct 393711 ACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGC-TCATGAGCTCGT 393653 Query 1630361 AGGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGG 1630420 | || ||| ||| | || || | ||| | || | | ||| | || Sbjct 393652 ACGTCTCGATCAC-----------CTTC-TCGATGTCCTC---GCCGTGGATGCCTACGG 393608 Query 1630421 CGACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGT 1630480 |||||||||||| ||||| ||| |||| |||| ||||| ||||| | | |||| Sbjct 393607 CGACGCGCATGATCATGTGCTGCGGCCTCTCGGCGACGGCGCCGTTGATGCGGAGAAGGT 393548 Query 1630481 AGGACCGGCGCATGGTCATGAGGCCAAAGTAG 1630512 |||| || | |||| ||| ||| |||||| Sbjct 393547 AGGAGCGCTCGAGGGTCTTGAAGCCGAAGTAG 393516 Score = 109 bits (120), Expect = 7e-18 Identities = 271/415 (65%), Gaps = 15/415 (4%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| ||||||||| ||||||||||| | | | |||| |||||||||| ||||||| Sbjct 394386 ACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGC 394327 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | || |||| ||||||||||| |||||||| || | || |||||| |||||||| Sbjct 394326 TCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCT 394267 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTC---CGCGCGCGGCC--CTN 1628336 | | ||||| ||| | || |||| | ||| ||| |||||| |||| | Sbjct 394266 CCAGAATGGCATACC-CAGCTTCTGCGC---CTTGACGGTCCTGCGCGCGAGGCCGGCGG 394211 Query 1628337 NNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGG 1628396 || || || ||||||| || ||||||| Sbjct 394210 TCTTCTCGTAGCGGGTGTAGAGCTCTCGAACTCCTCGCCGTAAACATCCGAAAGGCCGGT 394151 Query 1628397 CGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG---CGGCGCATAAA 1628453 |||||| || || || || ||||| ||||| || | || | ||| || Sbjct 394150 AGCCTCGTTAGGGCAGAACAGGCTCCAGT---CACCGTTCTGCTCGACCCTCTTCATGAA 394094 Query 1628454 GAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTG 1628513 ||||| | ||| || ||||| || ||||| | |||| | ||| ||||| ||||| Sbjct 394093 CAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCCTTACCGTG 394034 Query 1628514 GTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||||| ||||||||| | |||| | ||| |||||||||||||| |||||| Sbjct 394033 GTTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAG 393979 >seq306 Length=39361 Score = 123 bits (136), Expect = 3e-22 Identities = 97/115 (84%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||||| ||||| ||||| ||||| | || |||| | |||| |||||| Sbjct 15101 GCTGCGAACTACCTCGATATCAAACCTCTTCTCGACGTCGGTTGCA-GACTGTCGCCAAC 15159 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||||||||| ||||| ||||||||||| || |||||| || ||| Sbjct 15160 ATGATCAAGGGCAAGTCGCCAGAGGAAATCCGCAAGACGTTCAACATCCAGAACG 15214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107105389350604