Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 172 5e-38 seq346 104 2e-17 >seq2 Length=859439 Score = 172 bits (190), Expect = 5e-38 Identities = 1191/1887 (63%), Gaps = 97/1887 (5%) Strand=Plus/Minus Query 138157 TCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTT 138216 || ||||| || | ||||| ||| ||| | | || | | ||| ||||||||||| Sbjct 395338 TCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATTCCCGTC 395279 Query 138217 TTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTA-ACGCGTAAGTCGGTTT 138275 || | || || | |||| |||| | ||| || || || ||| || | | ||| Sbjct 395278 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTTACCCAT------GTTG 395225 Query 138276 CGCCAGAAAT----ATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 | | ||| ||||| | ||| || ||||| |||||||| ||| | || | Sbjct 395224 GGTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCCG 395165 Query 138332 CCATGTTAATTAAATTTTTACTTTTC-----ATCTCCCACACGGTCTTGTATAGATCACG 138386 |||||| || | |||||||| |||||||| ||||||||||| || || Sbjct 395164 CCATGTCGATGA-----TTACTTTTTGTGAGATCTCCCAGACGGTCTTGTACAG----CG 395114 Query 138387 A--ATATGTC--GCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGC 138442 | |||||| ||||| | | || || || ||| |||||| | || ||||||| Sbjct 395113 ATTTTATGTCCTTGGGTATGTTCGGGATGTTCTGGATGGAACCGTTGTCGGCGATGATGC 395054 Query 138443 GATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGT 138502 | || |||||| |||| | | ||| || | || | ||| |||| ||| | || Sbjct 395053 GGTTCTTCATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCACGGGT 394994 Query 138503 TTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCT 138562 ||| || ||| ||||| ||||| | || || || ||| |||||| ||| | || | Sbjct 394993 TTACGATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAGGGTT 394934 Query 138563 CAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCA 138622 | || | |||||| || || ||||| | ||||| ||||| |||||| ||| || | Sbjct 394933 CGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCGACGA 394874 Query 138623 AAAGAGAATTCCGTAAACCGTGAAGCTT---GATTCGTTCCTTGAGCGACGACCAGTCCC 138679 || || || || | |||| |||| || | ||||||||| || |||||||| Sbjct 394873 GGAG-GAGTTGCGCATGCCGT---GCTTGGAGACTTTTTCCTTGAGGGAGTCCCAGTCCC 394818 Query 138680 ACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGAC 138739 | | ||| | || | | |||||| ||| |||| | | || || || || Sbjct 394817 AGAGCTCGGTCGG-GTGACGCCCCACATGTCGAACTGCAGCTGGCCTTTGCTGGCCGGTG 394759 Query 138740 TGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCG 138799 || ||| | || ||||| |||||||| ||||| | ||| | || |||| | Sbjct 394758 AACCCTCGAAGGAGTCGTACTTGCCAAACTCCTGCGCGAGTTCGACGGAGGCTTCGACGG 394699 Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCT-CGGCGCTCTCG 138858 | || | ||| || || ||| ||||| | || ||| |||| ||||| ||| Sbjct 394698 CGCCGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGCTGCTTAGCCTGCGGCG-AGTCG 394640 Query 138859 TACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 ||||||| || ||| | || || || || || || || ||||| || | | ||| Sbjct 394639 AACGGCATACGCAGCGCCAAAAAGGCATCCGCGAGACCCTGAACGCCGACGGC-ATAGGT 394581 Query 138919 CGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATT 138978 | ||||| | | ||| | | || | |||| || || ||||| || |||||||| Sbjct 394580 CTGTGGCGGA-AGTTGGAGTTCCTGGCTCCTCGACGGGGTAGTAGTTGACCTCGATGATC 394522 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGT 139037 ||||| | ||| || ||||| ||||| ||| | | | | | | | || ||||| Sbjct 394521 TTGTTCAGATTGCGGACGACGACCTTCGTCACGT-CGTGGAGCTTCTGGAAGTCGTA--- 394466 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACA--CAAATCGAGGCTATGTTG 139095 | || | | ||| ||| ||| || || || | || ||||| || | |||| Sbjct 394465 ---CTCG--GACTTCG-CGATGTCCACGAA--CGTCGGCAGGGCGATCGACGCGAGGTTG 394414 Query 139096 CACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACAC 139155 ||||| || || || |||||| || ||| ||||| || || | |||| ||| | | Sbjct 394413 CACACGGCTACCTCATCGGGG-CGGAGTACTCGACGATCTCCGTGCACAGGTTAGAGCTC 394355 Query 139156 TTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATA 139215 |||||||| || | || | || ||||| || ||| || || || ||||| ||||| Sbjct 394354 TTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATG 394295 Query 139216 TACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGT 139275 ||||| || || || || || | ||| | |||| | | | || ||||| | Sbjct 394294 TACGGGGTTCCCGTCTCGGTCTGCGCCTCCAGAATG-----GCA----TACCCAGCTTCT 394244 Query 139276 ---ATTTGACGCACGT-----AAAGTTCGTCG---CGCTCGTACTTTTCGTAGAGTTCGT 139324 |||||| | | || || || |||||| |||||| || | Sbjct 394243 GCGCCTTGACGGTCCTGCGCGCGAGGCCGGCGGTCTTCTCGTAGCGGGTGTAGAGCTC-T 394185 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACC 139384 |||| || ||||| | || ||||| || | || || ||| || | || || Sbjct 394184 CGAACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCC 394125 Query 139385 ATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCA 139444 | | |||||| || ||| | | |||||||||| || || | ||| | ||| | | || Sbjct 394124 AGTCACCGTTCTGCTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACA 394065 Query 139445 AATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAA 139502 || | ||| | |||||| ||| ||| |||| | || ||||| || || Sbjct 394064 GGTCCCTGGCCCTGACCTCTTCCTTACCGTGGTT--CTTTCGGAGGTCGAGGAACTCGAA 394007 Query 139503 AACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT---TTGCCACC 139559 ||||| |||||||| || || || ||||| || | || || || | ||||| || Sbjct 394006 CACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTGCCGCC 393947 Query 139560 TTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGC 139619 || ||||||| | | | || ||||| || | || |||||| ||||| | | Sbjct 393946 CTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGA 393887 Query 139620 TGTTCCGTTGGT---GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGAT 139676 || || ||||| || | | | | | | || || |||| | || || | | Sbjct 393886 AGTACCATTGGTCCCGCGATGTACGAGCCCGT----AGAACGGATATTGTGGACGTGAAG 393831 Query 139677 GCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAA-TGTCTCGTATATAC 139735 |||| | | ||| || || || || || ||| | | ||| || ||||| |||| Sbjct 393830 ACCGA-TACACCGGCAGTCTTCGAGATCAATGCGC-AGGTCTTAAGGGTATCGTAGATAC 393773 Query 139736 CTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCG 139795 || || ||||| |||| ||| | ||| || ||||| || || ||||| | | Sbjct 393772 CTTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGG 393713 Query 139796 TGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCG 139854 | || || ||||| || || ||||| ||||| | ||| | | ||| | ||| Sbjct 393712 TACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGC-TCATGAGCTCG 393654 Query 139855 TACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGC 139914 ||||| ||||| | || | || ||| |||||||| || || | ||| ||||| | | Sbjct 393653 TACGTCTCGATCACCTTCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATC 393594 Query 139915 ATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGG 139974 || || || || ||||| || ||||| | ||| || || | ||| ||| Sbjct 393593 ATGTGCTGCGGCCTCTCGGCGACGGCGCCGTTGATGCGGAGAAGGTAGGAGCGCTCGAGG 393534 Query 139975 GTCTTGTAGCCAAAGTACCTATAGTTG 140001 |||||| |||| ||||| | |||||| Sbjct 393533 GTCTTGAAGCCGAAGTAGTTGTAGTTG 393507 >seq346 Length=29424 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || ||||| || || || ||||| |||||||| || || || | Sbjct 4913 ATGCAAAT-TTCGTCAAGACGCTTACGGGAAAGACTATCACGCTCGAGGTTGAGTCCTCT 4971 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || || ||||| || ||||| ||||| || || |||||||| Sbjct 4972 GACACGATAGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGCATTCC-CCCGATCAG 5030 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| ||||| | | |||| ||||||||| Sbjct 5031 CAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGGACTCTGTCCGATTATAAC 5090 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 5091 ATCCAGAAGGAGTCCACCCTTCAC 5114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895283027360