Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq162 159 5e-33 seq2 114 2e-19 seq306 109 9e-18 >seq162 Length=94999 Score = 159 bits (176), Expect = 5e-33 Identities = 236/331 (71%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| ||| |||||||||||||| || ||||| Sbjct 12772 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCACGCTT 12713 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| |||||||| ||| || ||| ||||| || |||||||||||||| Sbjct 12712 CTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATACCTTCGACGGCGGCAAA 12653 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| |||| |||||| ||| | | || | | |||||| || ||||| Sbjct 12652 AGCGACGAGACGCTGGGCAAAGGTGGAC---TCGTCGTCCTCGATCCAGCGGATGGCCCA 12596 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGT--CCTT 794576 || ||||| ||| | | | || | || ||||| ||| ||||| | ||| || Sbjct 12595 GTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGAAGAGATAGGTGCGCTG 12536 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 || | || ||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| Sbjct 12535 CTTG---GGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGTTTCCGAGTGAATGTT 12479 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || |||||| ||||| || |||||| Sbjct 12478 CTCCATCATGATCTGAAAGCCGTAGAAGCAG 12448 Score = 118 bits (130), Expect = 2e-20 Identities = 159/218 (73%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||| ||||| | || ||||| || ||||||| | | |||||||| Sbjct 12453 AAGCAGCGGGCTTCGGGGATCTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTG 12394 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| ||||| ||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct 12393 ACGATACCGTCAGAGGCGGCGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCG 12334 Query 796261 TCGCTGAGC---GAGACCCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316 ||| | ||| | ||||| | ||| | || | ||| |||| || |||||||| Sbjct 12333 TCGTTCAGCCTGTTGTTCCAGTCG-CCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGT 12275 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATA 796354 ||| || || ||||||||||| |||||||| | ||||| Sbjct 12274 CCAGAACGATGCCTCGGCCTTCTTGTACATTTGCCATA 12237 Score = 109 bits (120), Expect = 9e-18 Identities = 211/302 (70%), Gaps = 7/302 (2%) Strand=Plus/Minus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 || ||| ||||||||||||||||||||| | | |||| ||||||| | ||| Sbjct 13067 ACACGCTTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGACTCCATGAAGTCGAAG 13008 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACG 794036 ||||| || | |||| |||| | ||||| | | |||||||||||||||||||| Sbjct 13007 GGGTTCGCAGAGTTGTAGACCTTCCTGTTGCCGAGGGCCACAAGCAGGCGGTCGGCGACG 12948 Query 794037 AATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGA 794095 || || ||||| || ||| || |||||| ||||| | ||| || |||||| || | Sbjct 12947 AACTCGATGTATTGCTTCATCAGCTTGGCGTTGATGCCCAAGAGAGCGCACGGG-AGAGC 12889 Query 794096 CTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGC-ACGT 794154 ||| | | ||||| | ||| ||| |||||||| | ||||| | || | | | | | Sbjct 12888 CTCCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCAACGATGA-CAGCTTCGACGGCCT 12830 Query 794155 CGGACGACGGCTTGTCGACGAGCATCG-TGTAGAGCAGGCAGGCAAAGTCGCAATGCAGA 794213 | |||| ||| | ||| || | || |||| ||||||||||||||| || ||| Sbjct 12829 CCTTGCTCGGC-TGTTGTTGAG-ATGGCTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGA 12772 Query 794214 CC 794215 || Sbjct 12771 CC 12770 >seq2 Length=859439 Score = 114 bits (126), Expect = 2e-19 Identities = 272/412 (66%), Gaps = 9/412 (2%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633 ||| ||||| ||| ||||||||||| | | | | ||||||||||||| |||||||| Sbjct 394386 ACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGC 394327 Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693 | || |||| ||||||||||| ||||||||| || | ||||||||| |||||||| Sbjct 394326 TCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCT 394267 Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT---CGCGCGGCCCTNNN 2071750 | ||||| ||| | || |||| || |||||| |||| |||| Sbjct 394266 CCAGAATGGCATACCCAGCTT-CTGCGCCTTGAC---GGTCCTGCGCGCGAGGCCGGCGG 394211 Query 2071751 NNNNNNNNNNNNNNNAG-AGGGC-GTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGG 2071808 | || || || || | |||||| || ||||||| Sbjct 394210 TCTTCTCGTAGCGGGTGTAGAGCTCTCGAACTCCTCGCCGTAAACATCCGAAAGGCCGGT 394151 Query 2071809 CGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAG 2071868 |||||| ||||| || || |||||| ||| | | || | ||| ||||| Sbjct 394150 AGCCTCGTTAGGGCAGAACAGGCTCCAGTCACCGTTCTGCTCGACCCTCTTCATGAACAG 394091 Query 2071869 GTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 2071928 |||| | ||| ||| |||| || || || | |||| | ||| ||||| |||||||| Sbjct 394090 GTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCCTTACCGTGGTT 394031 Query 2071929 CTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 |||| |||||||| | |||| | ||| |||||||||||||| |||||| Sbjct 394030 CTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAG 393979 Score = 100 bits (110), Expect = 5e-15 Identities = 325/500 (65%), Gaps = 10/500 (2%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 |||||||| || || || |||||| | ||| | | |||||| | ||||||||| || Sbjct 395341 TGGTCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATTCCC 395282 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT-TCGG 2069369 |||||||| || ||| ||||| |||||| ||||| | | | ||| | || Sbjct 395281 GTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAA--GTTTACCCATGTTGG 395224 Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429 | | | || || ||| ||||||||||||||||||| | | | | ||| ||||| Sbjct 395223 GTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCCGC 395164 Query 2069430 CATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATG 2069489 |||||||||| | || | || | |||||| ||||||||| |||| | || | | Sbjct 395163 CATGTCGATGATTACTTTTTGTGAGATCTCCCAGACGGTCTTGTACAGCGATTTTATGTC 395104 Query 2069490 CGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTC 2069549 | || | | ||| || | ||| | || || | | ||||||| ||||| Sbjct 395103 CTTGGGTA--TGTTCGGGAT----GTTCTGGATGGAACCGTTGTCGGCGATGATGCGGTT 395050 Query 2069550 GCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGAC 2069609 | || |||| || || | | | | | || | ||| |||| || Sbjct 395049 CTTCATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCACGGGTTTAC 394990 Query 2069610 CACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCA 2069669 | || ||||| | ||| |||||||| | |||||||||| |||| | ||| | Sbjct 394989 GATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAGGGTTCGAA 394930 Query 2069670 CGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAG 2069729 |||| || || |||||||| ||||| | || || |||||| |||| ||||| || Sbjct 394929 GCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCGACGAGGAG 394870 Query 2069730 CGAGTTGCGCAGGCCGTACT 2069749 |||||||||| ||||| || Sbjct 394869 -GAGTTGCGCATGCCGTGCT 394851 >seq306 Length=39361 Score = 109 bits (120), Expect = 9e-18 Identities = 94/115 (82%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||||||||| ||||| || || ||||| | || |||| ||| || |||||| Sbjct 15101 GCTGCGAACTACCTCGATATCAAACCTCTTCTCGACGTCGGTTGCA-GACTGTCGCCAAC 15159 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||||||||| ||||| ||||||||||| || |||||| || ||| Sbjct 15160 ATGATCAAGGGCAAGTCGCCAGAGGAAATCCGCAAGACGTTCAACATCCAGAACG 15214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916202573680868