Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq70 104 2e-16 seq266 95.1 9e-14 >seq70 Length=193275 Score = 104 bits (114), Expect = 2e-16 Identities = 299/455 (66%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 |||| || |||||||| | ||| |||| ||||| | ||| |||| ||||| || || | Sbjct 65250 AATCGATACCTTCGAAGAGAGAGTCAATCTCAATGGAAGTCTGAGCGGAAGACGAGAGGG 65191 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137 ||| || ||||| || || || || | || | || | || || | | || | Sbjct 65190 TACGCTTGGCACGCTCGCAAGCGGTACGGAGACGGCGGAGAGCACGGGC-GTTGGAAGTA 65132 Query 282138 A-ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 | ||| | || | || | |||||| || | || | | || || ||||| || Sbjct 65131 AGATCCTTCTTGTGCTTGCGCTTGAACTCCTGGACGAAGTGGTTGACCAGGCGATTGTCG 65072 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||||||||| ||||| | ||||| || | || || | || | ||| | || || Sbjct 65071 AAATCTTCACCACCCAAGTGAGTATCACCAGCGGTGGCCTTGACCTCGAAGATACCCTCC 65012 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | || |||| ||||| ||| |||||||| | ||| || || || || || Sbjct 65011 TCAATGGTCAGGAGAGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACGTTG 64952 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 || || || || || | ||| || |||| |||||| || || || || || Sbjct 64951 CGCTCACCCTC-GCCTTCTTGTCCAAACCGTAAGCAATAGCAGCCGCGGTAGGCTCGTTG 64893 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 || || | || || || ||||| || || || ||||| || || || || | || Sbjct 64892 ATGATGCGCAGGACGTTGAGACCGGCGATAAGACCGGCATCCTTGGTAGCCTGGCGCTG- 64834 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 |||||||| || || ||||| || || |||||||| Sbjct 64833 GAATCGTTGAAGTAGGCAGGGACCGTGATAACGGC 64799 >seq266 Length=52917 Score = 95.1 bits (104), Expect = 9e-14 Identities = 161/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 432287 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACG 432346 ||| || ||||| ||| | || || ||| | |||||||||||||||||| | ||||| || Sbjct 11679 AGGCAAGGAAGGCCGTTTGAGGGGTAATCTTATGGGAAAGCGTGTCGAT-TTTCTGCCCG 11737 Query 432347 TACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTAT 432406 ||| || || || |||||| ||| | | || | ||||| |||||||||| || || Sbjct 11738 TACGGTCATCACCGGTGATCCAAATCTCTCGCTTGACGAAGTCGGTGTTCCTCGCACAAT 11797 Query 432407 TGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCA 432466 |||| || |||||| | | |||| ||||| | | ||||| | | | || Sbjct 11798 CGCGAGAACTCTTACGTATCCGGAAACGGTAACGCCATACAATATACAGAAGCTCCACCA 11857 Query 432467 ATTAGTGAAAAATGG--TAAAAGAGTATATCCAGGTGCCAATTTTGTAAT 432514 | | ||||| ||||| || ||| |||| |||||||| | |||||| Sbjct 11858 ACTTGTGAAGAATGGACCGAACGAG--CATCCTGGTGCCAAGTATGTAAT 11905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740610172541112