Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 430 1e-115 seq162 134 1e-26 seq346 114 1e-20 seq249 96.9 3e-15 seq4 91.5 1e-13 >seq2 Length=859439 Score = 430 bits (476), Expect = 1e-115 Identities = 1199/1817 (66%), Gaps = 48/1817 (3%) Strand=Plus/Minus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 ||||| | ||||||||| ||||||||||| ||| | ||| ||||| ||||| ||| Sbjct 395302 GTGCGTAAATAGTACATTCCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGAC 395243 Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAACA--GAT--TAAACGACTGGCTCTGGTC 148066 | | || ||| | || | | || ||| | | ||||||||||||||| Sbjct 395242 GTAA-----GTTTACCCATGTTGGGTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTC 395188 Query 148067 AATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTC-ATCTCCCAGG 148125 ||||||||| | ||| || ||||| || |||| | |||| | | ||||||||| Sbjct 395187 GATGAACGCGGACCTGTCTGCCGCCATGTCGATGATTA-CTTTTTGTGAGATCTCCCAGA 395129 Query 148126 CCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGC 148185 | |||||||||||| || || | | ||| ||| |||| ||| | || ||| Sbjct 395128 CGGTCTTGTACAGCGATTTTATGTCCTTGGGTATGTTCGGGATGTTCTGGATGGAACCGT 395069 Query 148186 GGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCAT 148245 || || | || | || ||| | || | | || || |||| ||||| | Sbjct 395068 TGTCGGCGATGATGCGGTTCTTCATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCT 395009 Query 148246 CGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGT 148305 | ||| || | || || | ||| || ||||||||||| ||||| || || | || Sbjct 395008 TTAGCAGCCACGGGTTTACGATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGT 394949 Query 148306 TGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGG 148365 || ||| | ||||| || |||||||| || | ||||| | || | || || | Sbjct 394948 TGGACGTGTAGGGTTCGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAG 394889 Query 148366 GCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAG 148425 ||||| ||| || || || |||||||||| ||| | || | ||| ||| || | Sbjct 394888 GCATGGGCGCGACGAGGAG-GAGTTGCGCATGCCGTGCTTGGAGACTTTTTCCTTGAGGG 394830 Query 148426 CCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGC 148485 |||||||||||||| | ||| || ||| |||||||||| ||||||| ||| Sbjct 394829 AGTCCCAGTCCCAGAGCTCGGTCGG-GTGACGCCCCACATGTCGAACTGCAGCTGGCCTT 394771 Query 148486 GGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGC 148545 ||| || || |||||| | ||| |||| || | || ||| |||||| | Sbjct 394770 TGCTGGCCGGTGAACCCTCGAAGGAGTCGTACTTGCCAAACTCCTGCGCGAGTTCGACGG 394711 Query 148546 TCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC---GCCG 148602 || |||| ||||||| ||| ||||||||| || || ||| ||| || ||| Sbjct 394710 AGGCTTCGACGGCGCCGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGCTGCTTAGCCT 394651 Query 148603 CCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGC 148662 || | | ||| |||||||||||||| || ||| || || || || ||||| |||| Sbjct 394650 GCGGCGAG---TCGAACGGCATACGCAGCGCCAAAAAGGCATCCGCGAGACCCTGAACGC 394594 Query 148663 CCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGT 148722 | ||| || | || | ||| | ||||||| | || | ||||| || |||| || Sbjct 394593 CGACGGCA-TAGGTCTGTGGCGGAAGTTGGAGTTCCTGGCTC-CTCGACGGGGTAGTAGT 394536 Query 148723 TGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATT 148782 || ||||||||||||| |||||||| || || ||||| || | | | ||| | Sbjct 394535 TGACCTCGATGATCTTGTTCAGATTGCGGACGACGACCTTCGTCACGTCGTGGAGCTTCT 394476 Query 148783 CAAAATCGTACTTGTCATCTACGATG--------CATCGGTTCACGGCGATAGAGGCTAG 148834 || ||||||| | | ||||| | |||| || |||||| || || || Sbjct 394475 GGAAGTCGTACTCGGACTTCGCGATGTCCACGAACGTCGG--CAGGGCGATCGACGCGAG 394418 Query 148835 ATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCT 148894 ||||||||||| ||||| ||||||| |||||| |||||||| | |||||| || Sbjct 394417 GTTGCACACGGCTACCTCAT-CGGGGCGGAGTACTCGACGATCTCCGTGCACAGGTTAGA 394359 Query 148895 GCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAG 148954 || |||||| ||||| |||||| || |||||||| ||||||| |||||||||||||| Sbjct 394358 GCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAG 394299 Query 148955 CATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTCCTGCGC 149014 ||||||||| || || || ||||| |||| ||| | | ||| | |||||| Sbjct 394298 CATGTACGGGGTTCCCGTCTCGGTCTGCGCCTCCAGAATG-GCATACCCAGCTTCTGCGC 394240 Query 149015 ----GCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGA 149070 || | ||| || || || | || |||||| || || || | ||||| Sbjct 394239 CTTGACGGTCCTGC-GCGCGAGGCCGGCGGTCTTCTCGTAGCGGGTGTAGAG-CTCTCGA 394182 Query 149071 ACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACA 149130 || |||||||||| ||| || |||| || || ||||| | || ||| Sbjct 394181 ACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCCAGT 394122 Query 149131 CGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGT 149190 | |||| | | || | |||||| ||||| |||||||||||||| ||||| | |||| Sbjct 394121 CACCGTTCTGCTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGT 394062 Query 149191 CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGT 149250 | | ||| || ||||| || ||| || |||| ||| | ||| | || Sbjct 394061 CCCTGGCCCTGACCTCTTCCTTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGAACACGT 394002 Query 149251 CCGCGTGCCACGGCTCAATGTACACCGCGAGCGC----GCCCTTGCGCTTGCCGCCCTGG 149306 |||||||||||||||| | ||| | |||| || | |||| | |||||||||||| Sbjct 394001 CCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTG-TTGCCGCCCTGG 393943 Query 149307 TCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTG 149366 ||||||| | || ||||||| ||||| | | ||| || | ||| ||| ||| Sbjct 393942 TCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTA 393883 Query 149367 CCGTTAGTAGAGCTA-ATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGAT 149425 || || || || | | ||| ||| | || | ||||| |||| | ||||| Sbjct 393882 CCATTGGTCCCGCGATGTACGA--GCCCGTAGAACGGATATTGTGGACGTGAAGACCGAT 393825 Query 149426 GCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGAT 149485 | | || || ||| ||||| |||||| || || |||||| || || || Sbjct 393824 ACACCGGCAGT-CTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAAT 393766 Query 149486 GCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGC 149545 ||||| |||||||| | || |||||||||| || ||||| | || || || Sbjct 393765 ACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGC 393706 Query 149546 CGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTC 149605 ||||| || || ||||| || || | || |||||| | |||||||| ||| Sbjct 393705 GTTGAACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGCTCATGAGCTCGTACGTCTC 393646 Query 149606 GAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTG 149665 || ||| || ||||| ||||| |||||||||| |||||||||||| | ||| ||||| Sbjct 393645 GATCACCTTCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTG 393586 Query 149666 CGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTA 149725 ||| | ||| || || | || ||| | |||| | || || |||||| | Sbjct 393585 CGGCCTCTCGGCGACGGCGCCGTTGATGCGGAGAAGGTAGGAGCGCTCGAGGGTCTTGAA 393526 Query 149726 GCCAAAGTACTTGTAGT 149742 ||| ||||| ||||||| Sbjct 393525 GCCGAAGTAGTTGTAGT 393509 >seq162 Length=94999 Score = 134 bits (148), Expect = 1e-26 Identities = 326/481 (68%), Gaps = 12/481 (2%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||| || |||||||| || || || ||||||||| || ||| Sbjct 12795 AGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTC 12736 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||||| || | |||||| |||| |||||||| || || ||| Sbjct 12735 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAG 12676 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG--CCGTCTTGC 120817 || | || || ||| |||||| ||||| | |||| ||| || || | |||| | | Sbjct 12675 AAGATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCC 12616 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACG 120877 |||||||| |||||||| |||||||| || | |||||| || ||||| | Sbjct 12615 --TCGATCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAG 12558 Query 120878 CGTTCAGCAG-CATGT-CGC-GCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGAT 120934 ||| | || | || ||| ||| | ||||| | || || | || ||| || ||| Sbjct 12557 CGTCGAAGAGATAGGTGCGCTGCTTGGGCTCCT-TGATAT-AGGT-ATCGATCAGGAGAG 12501 Query 120935 TGTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCT 120994 ||| |||||| ||| | | ||| |||| | || | ||| ||| | | || | Sbjct 12500 AGTAGGTTTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTT 12441 Query 120995 CCAGCTCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCG 121053 | | ||||| | |||| | | || || ||||| || ||||||| ||| Sbjct 12440 CGGGGATCTGCACCTCATTGCTG-AAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCA 12382 Query 121054 GCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTG 121113 | |||||||||||| || || ||||| |||||||| ||||||||||| | ||| || Sbjct 12381 GAGGCGGCGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTG 12322 Query 121114 T 121114 | Sbjct 12321 T 12321 >seq346 Length=29424 Score = 114 bits (126), Expect = 1e-20 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || |||||| || || || || |||||||||||||| Sbjct 5108 GGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCG--TCCTCGAGCTGCTTA 5051 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | ||||| |||||||| ||||| || |||||||||||||| ||||| | Sbjct 5050 CCGGCGAAGATGAGACGCTGCTGATCGGG-GGAATGCCTTCCTTGTCCTGAATCTTCGCC 4992 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | |||||| | || ||| || |||| |||| || || || || || Sbjct 4991 TTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCTTTCCCGTAAGC 4932 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||| |||| ||||| Sbjct 4931 GTCTTGACG-AAATTTGCAT 4913 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| || ||||| ||||||||||| | || ||| || |||||||| || Sbjct 5335 GGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCCAGCTGCTTACC 5276 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 5275 AGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTT 5216 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || || | |||| ||| || || || | ||| Sbjct 5215 CACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTTAAAGT 5156 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 5155 CTTCAC-AAAATCTGCAT 5139 >seq249 Length=58106 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 133468 ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCG 133526 ||||||| || || || || ||| || |||| | | | | ||||||||||| || ||| Sbjct 56500 ACTCTTT-TGGATGTTATAGTCGGACAGCGTGCGGCCATTT-TCGAGCTGCTTTCCGGCG 56443 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | || || |||||||||||| | |||||| ||||||||| |||||| ||||| Sbjct 56442 AAGATCAGACGCTGCTGGTCGAGCGGGATGTATTCCTTGTCTTGGATCTTGGCCTTGATA 56383 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | | | ||||| | || ||| || |||| ||||| || ||||| || || || || Sbjct 56382 TTGTTGATGGTGTCAGAGGACTCAACCTCGAGGGTGA-TGTCTTGCCCGTGAGGGTCTTG 56324 Query 133647 ACGAAAATCTGCAT 133660 ||||| |||||||| Sbjct 56323 ACGAAGATCTGCAT 56310 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/171 (75%), Gaps = 5/171 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATT-GTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || ||| ||| || |||| | | | || ||||||||||| Sbjct 56714 GGTGGACTCCTTCTGGATGTTTGTAGTCGAACAGCGTGCGGCCA-TCTTCGAGCTGCTTT 56656 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || |||| || |||||| ||||||||||||| | | ||||| | Sbjct 56655 CCGGCGAAGATCAGACGCTACTAGTCGGGCGGGATGCCTTCCTCGCCCTAAATCTTAGCC 56596 Query 133581 TTGA-GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTT 133630 |||| ||| || | ||||||| | ||| || |||||||||| |||||| Sbjct 56595 TTGATACTG-TCGATAGTGTCGGAAGACTCAACCTCGACGGTGATGGTTTT 56546 >seq4 Length=583001 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || ||||||||||||||| Sbjct 25170 TCCTCAAGCTGCTTTCC-GCGAAGATCAGACGCTGCTGGTCCGG-GGGATGCCTTCCTTG 25227 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||| || ||||| | || | ||||||| || ||| || |||| ||||| | Sbjct 25228 TCTTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATG 25287 Query 133626 GTTTTGCCGGTCAGAGT 133642 || ||||| || || || Sbjct 25288 GTCTTGCCCGTGAGGGT 25304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418310382880