Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq346 107 5e-18 >seq346 Length=29424 Score = 107 bits (118), Expect = 5e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || || || || | || ||||| || ||||| |||| || || ||| ||| Sbjct 5142 CAGATTTTGTG-AAGACTTTAACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCCGAC 5200 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || |||||| || Sbjct 5201 ACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCCCCGGACCAGCAG 5260 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| ||||||| ||||||||| | | |||||||| | Sbjct 5261 CGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGAAGGACTCTCTCTGATTACAATATT 5320 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || ||||||||||| Sbjct 5321 CAGAAGGAATCCACCCTTCACCTTGT 5346 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || ||||| || ||||| | || || || |||||||| | || Sbjct 4926 CAAGACGCTTACGGGAAAGACTATCACGCTCGAGGTTGAGTCCTCTGACACGATAGACAA 4985 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || ||||| ||| ||| | || | || ||||| Sbjct 4986 TGTCAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGATCAG-CAGCGTCTCATCTT 5044 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || ||||| || ||||||| ||| ||||||| ||||| Sbjct 5045 CGCCGGTAAGCAGCTCGAGGACGGCCGGACTCTGTCCGATTATAACATCCAGAAGGAGTC 5104 Query 206364 TACTCTTCACCTTGT 206378 || ||||||||||| Sbjct 5105 CACCCTTCACCTTGT 5119 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || || || ||||| | ||| || |||| | ||||||||| |||||| Sbjct 5346 ACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCC 5287 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| || || || Sbjct 5286 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 5255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814561463452