Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 >seq2 Length=859439 Score = 109 bits (120), Expect = 5e-19 Identities = 742/1176 (63%), Gaps = 29/1176 (2%) Strand=Plus/Minus Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 ||| | ||||||||||| || ||||||||| || | |||||| | |||||| | ||| Sbjct 394642 TCGAACGGCATACGCAGCGCCAAAAAGGCATCCGCGAGACCCTGAACGCCGACGGC-ATA 394584 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATA 147366 |||| || |||| | | | || | | | | ||| |||| |||| || || Sbjct 394583 GGTCTGTGGCGGAAGTTGGAGTTCCTGGCTC-CTCGACGGGGTAGTAGTTGACCTCGATG 394525 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAA 147426 |||||||| || || || || || || || || | | ||| |||| ||| || || Sbjct 394524 ATCTTGTTCAGATTGCGGACGACGACCTTCGTCACGTCGTGGAGCTTCTGGAAGTCGTAC 394465 Query 147427 GTCCCGTCTTCGACACGT--ACGCA--TTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 | | ||||| | || ||| | | || || |||||| ||||| || ||||| || Sbjct 394464 T--CGGACTTCGCGATGTCCACGAACGTCGG--CAGGGCGATCGACGCGAGGTTGCACAC 394409 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 ||| ||| |||| | || ||||| ||||| || | ||||||||| || || || Sbjct 394408 GGCTACCTCATCGGGG-CGGAGTACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGAT 394350 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 |||| || | ||| ||||| ||| ||||| ||||| ||| | ||||||||||| Sbjct 394349 CGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGG 394290 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGC----TCGCA 147658 || |||||| |||| || | || | || ||| | |||||| || Sbjct 394289 GGTTCCCGTCTCGGTCTGCGCCTCCA-GAATGGCATACCCAGCTTCTGCGCCTTGACGGT 394231 Query 147659 CCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGC 147718 || || ||| |||| || || ||||| || ||| | | ||| ||||| |||| Sbjct 394230 CCTGCGCGCGAGGCCGGCGGTC-TTCTCGTAGCGGGTGTA-GAGCTCTCGAACTCCTCGC 394173 Query 147719 CGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCG 147778 |||| ||| | |||||||| | || | || || | ||| ||| ||| | Sbjct 394172 CGTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCCAGTCACCGTTCT 394113 Query 147779 CGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTT 147838 | || | ||| ||||| || |||||||| || ||||| | || || | || Sbjct 394112 GCTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCC 394053 Query 147839 TGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT--AAGCACGCTATAGATGTCGGCGTG 147896 || || || || || | | || | | | | || | | | | ||| ||||| Sbjct 394052 TGACCTCTTC-CTTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGA-ACACGTCCGCGTG 393995 Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCAC----CTTTACGCTTTCCGCCCTGGTCGACAT 147952 ||| || || | ||||| || | |||| | || | || |||||||||||||| | Sbjct 393994 CCACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTG-TTGCCGCCCTGGTCGACGT 393936 Query 147953 GGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGG 148012 | || ||||||| ||||| | || ||| || || || | | ||| || |||| Sbjct 393935 ACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGG 393876 Query 148013 TGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGC 148072 | ||| | ||| | || | | ||| |||| || || || | | || Sbjct 393875 T-CCCGCGATGTACGAGCCCGTAGAACGGATATTGTGGACGTGAAGACCGATACACCGGC 393817 Query 148073 CGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 || ||| || || ||||| | || |||||| || || || ||||| | Sbjct 393816 AGT-CTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAATACTGTCAT 393758 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | | || ||||| | || ||||| | || ||||| ||| | Sbjct 393757 CCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGCGTTGAACA 393698 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252 | || || ||||| || || || || ||||| | |||||||| || | | Sbjct 393697 GCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGCTCATGAGCTCGTACGTCTCGATCACCT 393638 Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312 |||||||| |||||||| ||||| | ||||||||||||| ||||||||| || | | Sbjct 393637 TCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTGCGGCCTCT 393578 Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372 |||| || |||||| |||||| || |||||||| ||| | || |||| Sbjct 393577 CGGCGACGGCGCCGTTGATGCGGAGAAGGTAGGAGCGCTCGAGGGTCTTGAAGCCGAAGT 393518 Query 148373 ACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||||| | | || |||||| ||||| ||| Sbjct 393517 AGTTGTAGTTGTAGTCCTTCTCGTAGACGATGACCG 393482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608745452320