Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq162 89.7 5e-13 seq346 84.2 2e-11 >seq162 Length=94999 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 ||| || || || | ||| ||||| |||| | ||| ||||| ||||| || ||||| Sbjct 12413 GCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGAAGGCAAGGACGTGAG 12354 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | |||| | || || | ||||||||| | ||||||||||| | | |||||||| | Sbjct 12353 AGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCCAGTCGCCGAGATCCTTGGAGA 12294 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAAT-CGACCGCCTTCTTGTACGATTGCCA 110886 ||||| |||||| | ||||| || || | | |||||||||||| |||||| Sbjct 12293 GATCGATTTCTTCGGCGGTCCAGA-ACGATGCCTCGGCCTTCTTGTACATTTGCCA 12239 >seq346 Length=29424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| || || ||||| ||||| | |||||| | || || || | ||| || ||| Sbjct 5147 TTTGTGAAGACTTTAACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCCGACACCATC 5206 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || || || ||| ||||| |||||||| || || || ||||| | || Sbjct 5207 GACAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTT 5266 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | || || || || || ||||| | || | | || |||||||||||||| || Sbjct 5267 ATCTTCGCTGGTAAGCAGCTGGAAGACGGAAGGACTCTCTCTGATTACAATATTCAGAAG 5326 Query 25364 GAATCCACCATTCA 25377 ||||||||| |||| Sbjct 5327 GAATCCACCCTTCA 5340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092107763840