Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq162 253 3e-61 seq2 114 2e-19 >seq162 Length=94999 Score = 253 bits (280), Expect = 3e-61 Identities = 368/507 (73%), Gaps = 16/507 (3%) Strand=Plus/Plus Query 1455777 TATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTC 1455836 ||||| |||||||| || ||||||||||| || || ||||||||||| || |||| ||| Sbjct 12237 TATGGCAAATGTAC-AAGAAGGCCGAGGCATCGTTCTGGACCGCCGAAGAAATCGATCTC 12295 Query 1455837 GGCGCCGA-CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCAA 1455892 | || | ||| | ||||| ||||| ||||||||||||| | || ||| Sbjct 12296 TCCAAGGATCTCGG-CGACTGGAACAACAGGCTGAACGACGACGAGCGCTACTTTATCTC 12354 Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCC 1455952 |||||||| ||||| || ||||||| || || ||||| ||||||||| | | | Sbjct 12355 TCACGTCCTTGCCTTCTT-CGCCGCCTCTGACGGTATCGTCAACGAGAACCTCGTCCAGC 12413 Query 1455953 GCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCA 1456012 |||| | || ||||| || | || || || || | || ||||| || |||||| | Sbjct 12414 GCTTCAGCAATGAGGTGCAGATCCCCGAAGCCCGCTGCTTCTACGGCTTTCAGATCATGA 12473 Query 1456013 TCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGG 1456072 | || ||||| ||||| ||||||||||| ||||||||||| ||||| ||||||| || Sbjct 12474 TGGAGAACATTCACTCGGAAACCTACTCTCTCCTGATCGATACCTATATCAAGGAGCC-- 12531 Query 1456073 TCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | || | | ||| | ||||| ||| ||||| || | |||| | | ||| |||| Sbjct 12532 -CAAGCAGCGCACCTATCTCTTCGACGCTATCGAGACCATCCCGTGCATCAAGAAGAAGG 12590 Query 1456130 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 |||||||||| || |||||| | | || | || || ||||||| |||| ||||| Sbjct 12591 CCGACTGGGCCATCCGCTGGATCGAGGACGA-CGAGTCCAC-CTTTGCCCAGCGTCTCGT 12648 Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 || ||||||| |||||| || ||||| ||| || ||| ||||||||| ||||| Sbjct 12649 CGCTTTTGCCGCCGTCGAAGGTATCTTCTTCAGTGGTTCATTCGCCGCCATCTTCTGGCT 12708 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| || ||||||||||| || Sbjct 12709 CAAGAAGCGTGGTCTCATGCCCGGCCT 12735 Score = 118 bits (130), Expect = 2e-20 Identities = 232/331 (70%), Gaps = 9/331 (3%) Strand=Plus/Plus Query 1456460 GACTTTGCCTGTCTGCTCTACA-CGATGCTCGTCAACAAGCCGTCGACCGACGT-GCCCA 1456517 ||||||||||| || |||| || | || ||| ||||| |||| | || | | | | Sbjct 12782 GACTTTGCCTGCCTCCTCTTCAGCCAT-CTCAACAACA-GCCGAGCAAGGAGGCCGTCGA 12839 Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 ||| | ||||||| |||||||| ||| ||| | ||||| | | ||| | || ||| Sbjct 12840 AGCTG-TCATCGTTGAGGCCGTTACGATTGAGCAGGAGTTCCTTACGGAGGCTCTCCCGT 12898 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 || ||| | ||||| ||||||| ||| ||| || ||||| || || |||||||| Sbjct 12899 GCGCTCTCTTGGGCATCAACGCCAA-GCTGATGAAGCAATACATCGAGTTC-GTCGCCGA 12956 Query 1456638 CCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCAT 1456697 ||||||||| | ||| |||||| | | |||| |||| | || ||||| ||| | Sbjct 12957 CCGCCTGCTTGTGGCCCTCGGCAACAG-GAAGGTCTACAACTCTGCGAACCCCTTCGACT 13015 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 ||||||| |||| | | ||||||||||||||||||||| || || | || | Sbjct 13016 TCATGGAGTCGATCAGCTTGGCTGGCAAGACCAACTTTTTCGAGAAGCGTGTCTCGGACT 13075 Query 1456757 ACGCCAAGGCCGGCGTCACCGCCAAGCCAGG 1456787 || ||||| || |||| |||||| |||| Sbjct 13076 ACCAGAAGGCTGGTGTCATGGCCAAGTCAGG 13106 >seq2 Length=859439 Score = 114 bits (126), Expect = 2e-19 Identities = 143/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 262103 GCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTC 262162 |||||| | | ||| || | |||||| || || || |||||| | |||||||||||| | Sbjct 394257 GCCATTCTGGAGGCGCAGACCGAGACGGGAACCCCGTACATGCTGTACAAGGACGCCTGC 394316 Query 262163 AACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCTGTGCACCGA 262221 ||| || ||||||||| ||||||||||||| | | |||| | ||||||||||| || Sbjct 394317 AACAAGAAGAGCAACCAGAAGAACCTGGGCACGATCA-AGAGCTCTAACCTGTGCACGGA 394375 Query 262222 GATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCGAGCGTGGCCCT 262281 ||||||| ||| || | ||| |||| | |||||||||||| || | ||||| Sbjct 394376 GATCGTCGAGTACTCCGC-CCCGATGAGGTAGCCGTGTGCAACCTCGCGTCGATCGCCCT 394434 Query 262282 GCCCAAGTTTGT 262293 ||| | ||| || Sbjct 394435 GCCGACGTTCGT 394446 Score = 107 bits (118), Expect = 3e-17 Identities = 264/397 (66%), Gaps = 19/397 (5%) Strand=Plus/Plus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||| |||| |||| ||| | ||| ||||||| |||||| | ||| | || Sbjct 393571 GTCGCCGAGAGGCCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGG------- 393623 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTT 259908 || |||| | ||| | ||| ||| || |||||| |||| |||||| ||| Sbjct 393624 --CGAGGACA------TCGAGAAGGTGATCGAGACGTACGAGCTCATGA-GCAGCAAGTT 393674 Query 259909 GTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTC 259968 |||||| || |||| ||||| || || || || || || | |||||| || Sbjct 393675 CTTCACCCACGCTTCGCCGACGCTGTTCAACGCGGGTACCCCCCAGCCGCAGCTGAGCTC 393734 Query 259969 GTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCA 260028 |||||| || | | |||||||| || || || || ||||| || || || ||| Sbjct 393735 GTGCTTCCTCGTCGCCATGAAGGATGACAGTATTGAAGGTATCTACGATACCCTTAAGAC 393794 Query 260029 GTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGC 260088 ||||| | ||||| ||| | ||||| | |||||| || || ||||| | || | Sbjct 393795 CTGCGCATTGATCTCGAAGACTGCCGGTGT-ATCGGTCTTCACGTCCACAATATCCGTTC 393853 Query 260089 CGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCG 260148 ||||| | ||| | ||||| ||||| || ||||| || || | || ||||| | Sbjct 393854 TACGGGCTCGTACATCGCGGG-ACCAATGGTACTTCCAATGGTCTCATCCCGATGCTGAG 393912 Query 260149 CGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 || || ||| ||||||| | |||||||||||| || Sbjct 393913 GGTGTTCAACAACACGGCCAGGTACGTCGACCAGGGC 393949 Score = 86.0 bits (94), Expect = 9e-11 Identities = 322/501 (64%), Gaps = 8/501 (2%) Strand=Plus/Plus Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972 |||| ||| |||||||||| | ||||| |||| |||||| || || | ||||| |||| Sbjct 394851 AGCACGGCATGCGCAACTCCTC-CTCGTCGCGCCCATGCCTACCGCTTCCACGTCCCAGA 394909 Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGC 263032 |||| || || |||| ||||| | |||| |||||||||| | |||||||| | Sbjct 394910 TCCTCGGTTTCAACGAGTGCTTCGAACCCTACACGTCCAACATCTACTCCCGCCGCGTCC 394969 Query 263033 TCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCC 263092 || | ||||| || | || |||| ||| | ||| | | || | | || | Sbjct 394970 TCGCCGGCGAATTCCAGATCGTAAACCCGTGGCTGCTAAAGGACCTCGTCGAACTGGGTC 395029 Query 263093 TGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTG 263152 | |||| || | |||| |||| || | | || || | ||| | | Sbjct 395030 TCTGGAGCGATAACATGAAGAACCGCATCATCGCCGACAACGGTTCCATCCAGAACATCC 395089 Query 263153 ACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCA 263212 ||| | | || || | || | || | ||||||||| |||||| | | Sbjct 395090 ----CGAACA--TACCCAAGGACATAAAATCGCTGTACAAGACCGTCTGGGAGATCTCAC 395143 Query 263213 ACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGC 263272 | || | ||| || |||||||| ||| | | | | |||||||||||||||||| Sbjct 395144 AAAAAGTAATCATCGACATGGCGGCAGACAGGTCCGCGTTCATCGACCAGAGCCAGTCGC 395203 Query 263273 TCAACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGT 263332 | ||| | || | ||||| || | | | | ||||| |||||| ||| | | Sbjct 395204 TGAACATCCACATTAAAGACCCAACATGGGTAAACTT-ACGTCTATGCACTTCTACGGCT 395262 Query 263333 GGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCA 263392 || || |||||||| || ||||||||| | |||||| | |||| | ||||| Sbjct 395263 GGAAGAAGGGTCTCAAGACGGGAATGTACTATTTACGCACCATGGCCGCCTCTGCCGCCA 395322 Query 263393 TTCAATTCACCGTCGATCAGG 263413 |||||||||| ||||| |||| Sbjct 395323 TTCAATTCACTGTCGACCAGG 395343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177771461842744