Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq346 111 1e-19 >seq346 Length=29424 Score = 111 bits (122), Expect = 1e-19 Identities = 140/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| |||||||| | | || | |||| |||||||||||||| || || Sbjct 5328 TCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAG 5269 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||| ||| ||||| ||||| | | Sbjct 5268 ATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTTCACATTG 5209 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| || || ||||||| |||||| || || || || ||||| |||||| Sbjct 5208 TCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCACA 5149 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 5148 AA-ATCTGCAT 5139 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||||| || || || |||| || ||||||||||| || || Sbjct 5102 CTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAA 5043 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| | || |||| || ||||||||| ||||| ||| | | | Sbjct 5042 GATGAGACGCTGCTGAT-CGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATT 4984 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | |||||| || || ||||| | || || || Sbjct 4983 GTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCTTTCCCGTAAGCGTCTTGAC 4924 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 4923 GAA-ATTTGCAT 4913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791278412960