Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq346 105 7e-18 seq2 84.2 2e-11 >seq346 Length=29424 Score = 105 bits (116), Expect = 7e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||| || ||| Sbjct 5137 CCGCCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGAC 5078 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| || || || || || | ||||||||||||||| || Sbjct 5077 AGAGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGG-GGA 5019 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || ||||| ||| | ||||| || || || || Sbjct 5018 ATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCTATCGTGTCAGAGGACTCAACC 4959 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||| |||||||||| Sbjct 4958 TCGAGCGTGATAGTCTTTCCCGTAAGCGTCTTGACG-AAATTTGCAT 4913 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || |||||||| || ||||||||||| Sbjct 4911 CCACCACGGAGGCGGAGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 4852 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| || | |||||||||||| || || Sbjct 4851 AGGGTGCGGCCATCCTCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATCCGG-GGG 4793 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || |||||||| || || Sbjct 4792 ATACC-TCCTTATCCTGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACC 4734 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| || || || | || || ||||| ||||||||| Sbjct 4733 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||||||||| ||||| ||||| || | || ||| || Sbjct 5346 ACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCC 5287 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || || | |||||||| || || || || || || || || ||| Sbjct 5286 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGA 5227 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || || || || || || ||||| || Sbjct 5226 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTT 5167 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| || || ||||| ||||| Sbjct 5166 CCAGTTAAAGTCTTCAC-AAAATCTGCAT 5139 >seq2 Length=859439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/151 (73%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 8253 CGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAG 8312 ||| || || | ||||||||||||||||| ||||| |||||| || ||||| || | Sbjct 394277 CGAGACGGGAACCCCGTACATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAA 394336 Query 8313 CAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCC 8372 ||| ||||||| || || || |||||| | || || || ||||| ||| || Sbjct 394337 GAACCTGGGCACGATCAAGAGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCGC-CC 394395 Query 8373 CGACGAAGTGGCCGTTTGCAATCTAGCGTCG 8403 ||| || || ||||| ||||| || |||||| Sbjct 394396 CGATGAGGTAGCCGTGTGCAACCTCGCGTCG 394426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395797198240