Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq162 131 5e-25 >seq162 Length=94999 Score = 131 bits (144), Expect = 5e-25 Identities = 362/543 (67%), Gaps = 13/543 (2%) Strand=Plus/Plus Query 443336 GTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACT 443395 ||| |||||| || || || |||||||||||||| | | ||| |||||| | | || Sbjct 12268 GTTCTGGACCGCCGAAGAAATCGATCTCTCCAAGGATCTCGGCGACTGGAACAACAGGCT 12327 Query 443396 -ATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGACG 443454 | | | | | || ||| | || || | || | |||||||| || | |||| Sbjct 12328 GAACGA-CGACGAGCGCTACTTTATCTCTCACGTCCTTGCCTTCTTCGCCGCCTCTGACG 12386 Query 443455 GTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCC 443514 |||||||| ||||| || || ||| ||| | | ||| | | |||| |||| Sbjct 12387 GTATCGTCAACGAGAACCTCGTCCAGCGCTTCAGCAATGAGGTGCAGATCCCCGAAGCCC 12446 Query 443515 GCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGT 443574 ||| |||||||| || || | ||||||||||||||| | || |||| || Sbjct 12447 GCTGCTTCTACGGCTTTCAGATCATGATGGAGAACATTCACTCGGAAACCTACTCTCTCC 12506 Query 443575 TGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGTT--CA 443631 ||||| | || ||| || || || | | ||||| || |||| || || | | Sbjct 12507 TGATCGATAC-CTATATC--AAGGAGCCCAAGCAGCGCACCTATCTCTTCGACGCTATCG 12563 Query 443632 TGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGA--ACGAGA 443689 ||||| || |||||| | ||| | |||||| | | ||| |||| |||| Sbjct 12564 AGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATCCGCTGGATCGAGGACGACG 12623 Query 443690 AAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAG 443749 | || || ||| | | |||| || ||||||||||| | |||||||| | || || || Sbjct 12624 AG-TC-CACCTTTGCCCAGCGTCTCGTCGCTTTTGCCGCCGTCGAAGGTATCTTCTTCAG 12681 Query 443750 CGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCT 443809 || | || ||| ||||||||||| | || |||||||| || |||| ||| ||||||| Sbjct 12682 TGGTT-CATTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCT 12740 Query 443810 TTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | ||||| || ||| || ||||||||| | || |||||| ||||| || |||| Sbjct 12741 TCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTCT 12800 Query 443870 ACA 443872 || Sbjct 12801 TCA 12803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588327615571340