Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 221 2e-52 seq162 98.7 1e-15 >seq2 Length=859439 Score = 221 bits (244), Expect = 2e-52 Identities = 1148/1801 (64%), Gaps = 42/1801 (2%) Strand=Plus/Minus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| || |||||||| || | ||||| |||| | |||||||| | || || Sbjct 395294 ATAGTACATTCCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTT 395235 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA-GCGCC 110486 ||| | || |||| ||| || ||||| || || ||||| ||||| ||| Sbjct 395234 ACCCATGTTGGGTCTTTA-ATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGA 395176 Query 110487 CCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA-ATTTCCCAAACTGTGCGATAG 110545 || || ||||||||| || |||| | ||| | | | || ||||| || || || Sbjct 395175 CCTGTC-TGCCGCCATGTCGATGAT-TACTTTTTGTGAGATCTCCCAGACGGTCTTGTAC 395118 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 || || || || | || || | | ||| |||||||||||||| | | Sbjct 395117 AGCGATTTTATGTCCTTGGGTATGTTCGGGATGTTCTGGATGGAACCGTTGTCGGCGATG 395058 Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665 ||| | | |||||| | | | ||||||||| | | |||||| || | || | Sbjct 395057 ATGCGGTTCTTCATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCAC 394998 Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725 ||| || || || || || |||||| | | ||||||||| | ||||| Sbjct 394997 GGGTTTACGATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAG 394938 Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785 ||||| ||||| || || ||| | ||| || | ||||| || || ||||| || || Sbjct 394937 GGTTCGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCG 394878 Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845 | | || ||| || | || | || || ||||||||| |||||||| Sbjct 394877 ACGAGGAGGA-GTTGCGCATGCCGTGCTTGGAGACTTTTTCCTTGAGGGAGTCCCAGTCC 394819 Query 110846 TAGTTGAGCTTGGTT---TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902 || |||| ||| | || |||||||||| ||||| ||| |||| | || Sbjct 394818 CAG---AGCTCGGTCGGGTGACGC-CCCACATGTCGAACTGCAGCTGGCCTTTGCTGGCC 394763 Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962 || |||||||| |||| || || || | | || | ||| | || || Sbjct 394762 GGTGAACCCTCGAAGGAGTCGTACTTGCCAAACTCCTGCGCGAGTTCGACGGAGGCTTCG 394703 Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022 | || |||| || || || || ||||| | |||| || ||| || | || Sbjct 394702 ACGGCGCCGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGCTGCTTAGCCTGCGGCGAG 394643 Query 111023 TCAAATG-CGTA-GCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080 || || | | || || || | ||| || ||||||||||||| ||||| || | || Sbjct 394642 TCGAACGGCATACGCAGCGCCAAA--AAGGCATCCGCGAGACCCTGAACGCCGACGGCA- 394586 Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140 |||||||||| || | || || || | || ||| ||||| || | || || | Sbjct 394585 TAGGTCTGTGGCGGAAGTTGGAGTTCCTGGCTC-CTCGACGGGGTAGTAGTTGACCTCGA 394527 Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 111200 ||| ||| ||||| | || | ||| || | || || || || | | || Sbjct 394526 TGATCTTGTTCAGATTGCGGACGACGACCTTCGTCACGTCGTGGAGCTTCTGGAAGTCGT 394467 Query 111201 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 111260 | | || | | || || | || |||||||| || || | ||||| || | Sbjct 394466 ACTCGGACTTCGCGATGTCCACGAACGTCGGCAGGGCGATCGACGCGAGGTTGCACACGG 394407 Query 111261 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCG 111320 | |||||| | | |||||| | || || || || | ||| || ||||| |||| Sbjct 394406 CTACCTCATCGGGG-CGGAGTACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGATCG 394348 Query 111321 TCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 111380 | |||| ||||| ||||| |||||||||||||| || |||||||| |||||||| || | Sbjct 394347 TGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGGGG 394288 Query 111381 TCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCT----GGTACA 111436 | |||||||| ||||| | | ||||| || | || | | || ||| || ||| | Sbjct 394287 TTCCCGTCTCGGTCTGCGCCTCCAGAATGGCATACCCAGCTTCTGCGCCTTGACGGTCC- 394229 Query 111437 ATG-GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495 || ||| | ||| | | | |||||| |||||||| | || |||||||| || Sbjct 394228 -TGCGCGCGAGGCCGGCGGT-CTTCTCGTAGCGGGTGTAGAGCTC-TCGAACTCCTCGCC 394172 Query 111496 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC 111555 | || || || || | |||| || || ||||| || ||| | ||| | Sbjct 394171 GTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCCAGTCACCGTTCTG 394112 Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 111615 ||| |||| ||||||||| ||||| || | ||| |||| | || || || || || Sbjct 394111 CTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCT 394052 Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675 ||||||| | ||| ||||| ||| | || |||||||| | | ||||||||||| Sbjct 394051 GACCTCTTCCTTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCCA 393992 Query 111676 TGGCTCAAGATAGACTGCGATAGATC----CCTTTCGACGCCCAGCTTGATTTACATAGC 111731 ||||| || |||| ||||| || | ||||| | | || | || | || || | Sbjct 393991 CGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTG-CCGCCCTGGTCGACGTACC 393933 Query 111732 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 111791 || ||| ||| || || | ||||| || || | ||||| || |||||| |||| Sbjct 393932 TGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGGTCC 393873 Query 111792 CCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCC 111850 | ||| |||||| | | | | || |||| ||| | || ||| | || || Sbjct 393872 CGCGATGTACGAG--CCCGTAGAACGGATATTGTGGACGTGAAGACCGATA-CACCGGCA 393816 Query 111851 CACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCC 111910 ||| ||||| || || | |||| || | |||||||| | || ||| ||| Sbjct 393815 GTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAATACTGTCATCC 393756 Query 111911 TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGG 111970 || |||||| |||||||| | || |||||| || ||||| || ||||| || Sbjct 393755 TTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGCGTTGAACAGC 393696 Query 111971 GTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAG 112028 || || | ||||| ||| | | |||| | ||| ||||| ||||| | || Sbjct 393695 GTCGGCGAAGCGTGGGTGA--AGAACTTGCTGCTCATGAGCTCGTACGTCTCGATCACCT 393638 Query 112029 AATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTT 112088 || ||||| || ||||||||||| | ||||| ||||||| ||||| ||| || | | Sbjct 393637 TCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTGCGGCCTCT 393578 Query 112089 CCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGT 112148 | || | ||| | || || |||| ||| ||| ||||| |||| || |||| Sbjct 393577 CGGCGACGGCGCCGTTGATGCGGAGAAGGTAGGAGCGCTCGAGGGTCTTGAAGCCGAAGT 393518 Query 112149 A 112149 | Sbjct 393517 A 393517 >seq162 Length=94999 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || |||||||||||| || ||||| || || || || |||||| || || Sbjct 12790 GGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCC 12731 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | ||| | || ||| |||||| || ||||||||| Sbjct 12730 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGAT 12671 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAA 122836 ||| || || ||||| || | || || | ||| |||| | || | | | | || | Sbjct 12670 ACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTG-GACTCGTCGTCCTCGA 12612 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 ||| || ||||| | |||||||||| || || || | || | ||| || || | Sbjct 12611 TCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGA 12552 Query 122897 A 122897 | Sbjct 12551 A 12551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028765635200