Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 223 4e-53 seq162 181 1e-40 >seq2 Length=859439 Score = 223 bits (246), Expect = 4e-53 Identities = 1058/1644 (64%), Gaps = 48/1644 (3%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| ||||||||||| |||| ||||||| | || | ||||| || | | || Sbjct 395293 TAGTACATTCCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTTA 395234 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTCC 117961 | | | || |||| ||| || ||||| ||| || |||||||| ||| | Sbjct 395233 CCCATGTTGGGTCTTTA-ATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGAC 395175 Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTT-GATTTCCCACACAGTCCTGTAGA 118020 | | || |||||||| || || | | ||| | | ||| ||||| || ||| |||| | Sbjct 395174 CTG-TCTGCCGCCATGTCGATGAT-TACTTTTTGTGAGATCTCCCAGACGGTCTTGTACA 395117 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 | || || || | || || | | ||| || |||||||| || | || | Sbjct 395116 GCGATTTTATGTCCTTGGGTATGTTCGGGATGTTCTGGATGGAACCGTTGTCGGCGATGA 395057 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCT 118140 || | | |||||| | | ||||||||| | | ||| |||| | || | Sbjct 395056 TGCGGTTCTTCATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCACG 394997 Query 118141 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATG 118200 || || | || || || |||||| ||| | ||||| |||| |||||| | Sbjct 394996 GGTTTACGATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAGG 394937 Query 118201 GCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCA 118260 | || |||||||| ||| ||| | ||| |||| ||||| || || |||||||| || | Sbjct 394936 GTTCGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCGA 394877 Query 118261 TGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGT 118320 ||| ||| ||| || | || | | | ||||||||| | ||||||||| Sbjct 394876 CGAGGAGGA-GTTGCGCATGCCGTGCTTGGAGACTTTTTCCTTGAGGGAGTCCCAGTCCC 394818 Query 118321 AGTTGAGCTTTGTC---TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTG 118377 || |||| ||| | | | |||||| || ||||| || |||| | || | Sbjct 394817 AG---AGCTCGGTCGGGTGACGCC-CCACATGTCGAACTGCAGCTGGCCTTTGCTGGCCG 394762 Query 118378 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGA 118437 | || ||||| || | || || ||| ||| ||| | |||| | || |||| Sbjct 394761 GTGAACCCTCGAAGGAGTCGTACTTGCCAAACTCCTGCGCGAGTTCGACGGAGGCTTCGA 394702 Query 118438 GGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCT-CGTCGGAA 118496 ||| |||| || || || || || || | |||| ||| |||| || || | Sbjct 394701 CGGCGCCGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGCTGCTTAGCCTGCGGCG-AG 394643 Query 118497 TCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 118554 || |||| | || || | ||| || ||||||||||||| || || |||| | || Sbjct 394642 TCGAACGGCATACGCAGCGCCAAA--AAGGCATCCGCGAGACCCTGAACGCCGACGGCA- 394586 Query 118555 TTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGA 118614 | || | || | | || || |||| || ||| ||||| || | || |||| Sbjct 394585 TAGGTCTGTGGCGGAAGTTGGAGTTCCTGGCTC-CTCGACGGGGTAGTAGTTGACCTCGA 394527 Query 118615 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 118674 | | | | || ||||| | ||| ||||| || | || || ||||| | | | || Sbjct 394526 TGATCTTGTTCAGATTGCGGACGACGACCTTCGTCACGTCGTGGAGCTTCTGGAAGTCGT 394467 Query 118675 AACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733 | || || | | | | || || | || |||||||| ||||| || || ||||| Sbjct 394466 A-CTCGGACTTCGCGATGTCCACGAACGTCGGCAGGGCGATCGACGCGAGGTTGCACACG 394408 Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793 | |||||| | | |||||| | || |||||||||| ||| || ||||| || Sbjct 394407 GCTACCTCATCGGGG-CGGAGTACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGATC 394349 Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853 ||||||| |||||| || || ||| |||| || || |||||||| |||||||| || Sbjct 394348 GTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACGGG 394289 Query 118854 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTG 118913 || |||||||| || || | || ||||| || | || | || || || | || || Sbjct 394288 GTTCCCGTCTCGGTCTGCGCCTCCAGAATGGCATACCCAGCTTCTGCGCCTTG-ACGGTC 394230 Query 118914 ----GCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC 118969 ||| | || | ||||| ||||| |||||||| || | ||||| || || Sbjct 394229 CTGCGCGCGAGGCCGGCGGTCTTC-TCGTAGCGGGTGTAGAGCTCT-CGAACTCCTCGCC 394172 Query 118970 CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTC 119029 | || || || || | |||| | |||||||| || ||| | ||| || Sbjct 394171 GTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCCAGTCACCGTTCTG 394112 Query 119030 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC-GACAGC 119088 ||| |||| ||||||||| ||||| || | |||||| || |||| || |||| | | Sbjct 394111 CTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCT 394052 Query 119089 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 119148 || || |||| | || || || || | || | || || | | |||||||||| Sbjct 394051 GACCT-CTTCCTTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCC 393993 Query 119149 ACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATAC 119204 |||| || ||||| | |||| | ||| |||| | | || |||||| || ||| Sbjct 393992 ACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTG-CCGCCCTGGTCGACGTAC 393934 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTC 119264 || || ||| ||| || || | ||||| || |||| ||||| ||| ||||| ||| Sbjct 393933 CTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGGTC 393874 Query 119265 CCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGC 119323 || ||| |||||| | | | | || || ||||| ||| | ||| ||| | || || Sbjct 393873 CCGCGATGTACGAGCC--CGTAGAACGGATATTGTGGACGTGAAGACCGATA-CACCGGC 393817 Query 119324 CCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACC 119383 ||| ||||| ||||| | | || | ||||||| || || || |||| | Sbjct 393816 AGTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAATACTGTCATC 393757 Query 119384 CTTATTTGCGATGAGGAAGC---AGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAA 119440 ||| | |||| |||||||| |||| || || ||| ||| ||||| |||||||| Sbjct 393756 CTTCATGGCGACGAGGAAGCACGAGCT---CAGCTGCGGCTGGGGGGTACCCGCGTTGAA 393700 Query 119441 GAGAGTTGGTGTCGCGTGGATGAA 119464 || || || | |||||| |||| Sbjct 393699 CAGCGTCGGCGAAGCGTGGGTGAA 393676 >seq162 Length=94999 Score = 181 bits (200), Expect = 1e-40 Identities = 540/817 (66%), Gaps = 26/817 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 |||||| || ||||||||||| ||||| ||||| || |||||||||| |||||| Sbjct 13076 TAGTCCGAGACACGCTTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGACTCCATG 13017 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || |||||| ||||| | | || ||| | | | || || | Sbjct 13016 AAGTCGAAGGGGTTCGCAGAGTTGTAGACCTTCCTGTTGC--CGAGGGCCACAAGCAGGC 12959 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | |||| |||| ||||| | |||| || || ||| || || | ||| | Sbjct 12958 GGTCGGCGACGAACTCGATGTATTGCTTCATCAGCTTGGCGTTGATGCCCAAGAGAGCGC 12899 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG---G 129962 | ||||| || ||| | |||| ||| |||||| || || || |||||| | Sbjct 12898 ACGGGAGAGCCTCCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCA---ACGATGACAG 12842 Query 129963 CGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 130022 | | | || |||| ||| || || ||| | | ||||||| |||||| | Sbjct 12841 CTTCGACGGCCTCCTTGCTCGG-CTGTTGTTGAGATGGCTGAAGAGGAGGCAGGCAAAGT 12783 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | ||||||||||||||||||||||||||| || || |||||| ||| || ||||||| Sbjct 12782 CGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGA 12723 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 |||| |||||||| | |||||| || || ||||| ||| ||||||||| || || | Sbjct 12722 GACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATACCTTCGA 12663 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACT 130199 | || || || | |||||||| ||||||| ||||| | || || | ||| Sbjct 12662 CGGCGGCAAAAGCGACGAGACGCTGGGCAAAGG---TGGACTCGTCGTCCTCGATCCAGC 12606 Query 130200 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG-T 130258 || ||||| | ||||| |||| ||| ||||||| ||||| ||| || || ||||| | Sbjct 12605 GGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGAAGAGAT 12546 Query 130259 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCA 130318 | | | || || || ||||| || |||| || || || || ||||| Sbjct 12545 AGGTGCGCTGCT-TGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGTTTCCGAG 12487 Query 130319 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 130377 || | | | ||| || | |||| | ||||||| |||| |||||| ||||| || Sbjct 12486 TGAATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGATCTGCAC 12428 Query 130378 CTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 130436 ||||| ||| || | | || ||||| || || || || || | || || | Sbjct 12427 CTCAT-TGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGA 12369 Query 130437 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGT 130493 | || |||| | || || | | || | |||||||| | | ||||||||| Sbjct 12368 AGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCCAGTCGC 12309 Query 130494 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | |||||||| |||||||| | || || || ||||| Sbjct 12308 CGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCA 12272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432015058720