Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 224 1e-53 seq162 141 1e-28 >seq2 Length=859439 Score = 224 bits (248), Expect = 1e-53 Identities = 1118/1745 (64%), Gaps = 64/1745 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| |||||||||| ||| | || || || || || ||||| || || Sbjct 393583 CCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGGCGAGGACATCGAGAAGGTG 393642 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||| ||||| ||| | |||| | | ||| ||||| | || || || | Sbjct 393643 ATCGAGACGTACGAGCTCATGAGCAGCAAGTTCT--TCACCCACGCTTCGCCGACGCTGT 393700 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || ||||| || || || || | |||||||| |||||| ||||| | Sbjct 393701 TCAACGCGGGTACCCCCCAGCCGCAGCTGAGCTCGTGCTTCCTCGTCGCCATGAAGGATG 393760 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||| | || |||| | || || ||||| ||| || | Sbjct 393761 ACAGTATTGAAGGTATCTACGATACCCTTAAGACCTGCGCATTGATCTCGAAGACTGCCG 393820 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGACA 104518 | | ||| || | ||| |||| || | | | | |||||| ||| ||||| Sbjct 393821 GTG-TATCGGTCTTCACGTCCACAATATCCGTTCTACGGG--CTCGTACATCGCGGGACC 393877 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||||| || ||||| | || || ||||| | || || ||| ||| || | || Sbjct 393878 AATGGTACTTCCAATGGTCTCATCCCGATGCTGAGGGTGTTCAACAACACGGCCAGGTAC 393937 Query 104579 GTAAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || | || | || | | ||||| | || ||||| |||| || ||||| ||||| Sbjct 393938 GTCGACCAGGGCGG-CAACAAAAGGCCCGGTGCTTTCGCAATCTACCTCGAGCCGTGGCA 393996 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 |||||| | | |||||||| || | || ||||| ||| | || |||| || Sbjct 393997 CGCGGACGTGTTCGAGTTCCTCGACCTCCGAAAGAACCACGGTAAGGAAGAGGTCAGGGC 394056 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 | | || || |||| ||| |||||| | || || || ||||||||||| || ||| ||| Sbjct 394057 CAGGGACCTGTTCTACGCCCTCTGGGTGCCCGACCTGTTCATGAAGAGGGTCGAGCAGAA 394116 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 || | ||| || || || || || |||| | || || || |||| || || Sbjct 394117 CGGTGACTGGAGCCTGTTCTGCCCTAACGAGGCTACCGGCCTTTCGGATGTTTACGGCGA 394176 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGG----GCGACTGCGACGG 104870 |||||| | || || ||||| ||||| ||||| | ||| ||| ||| | Sbjct 394177 GGAGTTCG-AGAGCTCTACACCCGCTACGA-GAAGACCGCCGGCCTCGCGCGCAGGACCG 394234 Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | | || || || | || | || ||||| || | || |||||||| || || || | Sbjct 394235 T-CAAGGCGCAGAAGCTGGGTATGCCATTCTGGAGGCGCAGACCGAGACGGGAACCCCGT 394293 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 ||||||| ||||| |||||||| ||| | ||||| || || ||||| |||| ||||| Sbjct 394294 ACATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGCACGATCA 394353 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 |||| || || || || || || ||| | || | | | | |||||| || |||| Sbjct 394354 AGAGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCG-CCCCGATGAGGTAGCCGTGT 394412 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC---ATTTG 105107 | |||||||| || ||||| || || | || ||||| || | | ||| | | | Sbjct 394413 GCAACCTCGCGTCGATCGCCCTGCCGACGTTCGTGGA--CATCG-CGAAGTCCGAGTACG 394469 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | || |||||||| || ||||| ||| | || || |||| | || | Sbjct 394470 ACTTCCAGAAGCTCCACGACGTGACGAAGGTCGTCGTCCGCAATCTGAACAAGATCATCG 394529 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || | |||||||| ||| || | || || || | | ||| | || | || Sbjct 394530 AGGTCAACTACTACCCCGTCGAG-GAGCCAGGAACTCCAACTTCCGCCACAGACCTA-TG 394587 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC-- 105285 |||| ||||||||||||||||||| || |||| ||| || || ||| Sbjct 394588 CCGTCGGCGTTCAGGGTCTCGCGGATGCCTT-----TTTGGCGCTGCGTATGCCGTTCGA 394642 Query 105286 --CGACG-AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || || | || ||| | | || | || || ||||| || || |||| ||| | Sbjct 394643 CTCGCCGCAGGCTAAGCAGCTGAACCTCCAGATCTTCGAGACGATCTACCACGGCGCCGT 394702 Query 105343 TG-AGGCGAGTTCAGAGTTG-GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 | || | || | | | |||| ||| ||| || || |||| |||||||| Sbjct 394703 CGAAGCCTCCGTCGAACTCGCGCAGGAGTT--TGGCAAGTACGACTCCTTCGAGGGTTCA 394760 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA---GACCAAGCTTCAC 105457 || || |||| ||| || || || ||||||| || | |||| |||| | Sbjct 394761 CCGGCCAGCAAAGGCCAGCTGCAGTTCGACATGTGGG-GCGTCACCCGACCGAGCT---C 394816 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | |||||||| | ||||||||| || || | || | || ||| |||||| Sbjct 394817 TGGGACTGGGACTCCCTCAAGGAAAAAGTCTCCAAGCACGGCATGCGCAAC-TCCTCCTC 394875 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | || || ||||| || || ||||| | || ||| | ||| || || ||||| ||| Sbjct 394876 GTCGCGCCCATGCCTACCGCTTCCACGTCCCAGATCCTCGGTTTCAACGAGTGCTTCGAA 394935 Query 105578 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 ||||||||| | |||||||| | | |||||| || || || ||| || ||| Sbjct 394936 CCCTACACGTCCAACATCTACTCCCGCCGCGTCCTCGCCGGCGAATTCCAGATCGTAAAC 394995 Query 105638 AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 105697 | || | | |||||| || | ||||||||| | | | |||||| | | | Sbjct 394996 CCGTGGCTGCTAAAGGACCTCGTCGAACTGGGTCTCTGGAGCGATAACATGAAGAACCGC 395055 Query 105698 AT----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAA 105753 || | || | | |||||||| || || || | | || || || || || || Sbjct 395056 ATCATCGCCGACAAC----GGTTCCATCCAGAACATCCCGAACATACCCAAGGACATAAA 395111 Query 105754 GAAGTTGTACCGCACAGTTTGGGAAATC-AAGATGAAGGATGTCATTGACATGGCCGCAG 105812 | ||||| || || ||||| ||| | | ||| | |||| |||||||| |||| Sbjct 395112 ATCGCTGTACAAGACCGTCTGGGAGATCTCACAAAAAGTA-ATCATCGACATGGCGGCAG 395170 Query 105813 ATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACG 105871 | | | ||| ||||| || || || || |||| || ||| |||| || | Sbjct 395171 A-CAGGTCCGCGTTCATCGACCAGAGCCAGTCGCTGAACATCCACAT-TAAAGACCCAAC 395228 Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931 ||| || || | ||||||||| | ||| | ||||||||||||||||| ||||| ||| Sbjct 395229 ATGGGTAAACTTACGTCTATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACGGGAATG 395288 Query 105932 TATTA 105936 || || Sbjct 395289 TACTA 395293 >seq162 Length=94999 Score = 141 bits (156), Expect = 1e-28 Identities = 179/244 (73%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || || ||| | || | ||||| || | ||||| || || ||||| || Sbjct 12548 CTCTTCGACGCTATCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATCCGC 12607 Query 94774 TGGTTTGATACAAAGTCGCGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 94831 ||| | || | | || || | |||||| |||| ||| |||| ||||| || | Sbjct 12608 TGGATCGAGG--ACGACGAGTCCACCTTTGCCCAGCGTCTCGTCGCTTTTGCCGCCGTCG 12665 Query 94832 AGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCA 94891 | |||||||||||| |||||| ||| ||| || | |||||||||||||| ||||||| Sbjct 12666 AAGGTATCTTCTTCAGTGGTTCATTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCA 12725 Query 94892 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGT 94951 |||| || || ||||||||||||||| ||||| ||||||||||| |||||| || | Sbjct 12726 TGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACCGACT 12785 Query 94952 TTGC 94955 |||| Sbjct 12786 TTGC 12789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257796206880