Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq70 168 2e-36 seq346 152 2e-31 >seq70 Length=193275 Score = 168 bits (186), Expect = 2e-36 Identities = 712/1111 (64%), Gaps = 10/1111 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||| || || |||||| | | || || || | |||||| | || | Sbjct 64722 CCCGAAGAAATCTCTTCCATGGTTCT-GACCAAGTGCGCGAGACTGCTGAGTCTTACCTC 64780 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | || || | | || ||||| || || || ||||| || || ||| || |||| Sbjct 64781 GGCGGCACCGTCAACAACGCCGTTATCACGGTCCCTGCCTACTTCAACGATTCC-AGCGC 64839 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || || || || | || || || | || || || || Sbjct 64840 CAGGCTACCAAGGATGCCGGTCTTATCGCCGGTCTCAACGTCCTGCGCATCATCAACGAG 64899 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || ||||| || || | || || | | | || || || | Sbjct 64900 CCTACCGCGGCTGCTATTGCTTACGGTTTGGACAAGAAG-GCGAGGGTGAGCGCAACGTC 64958 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||| | ||||||||||| || ||||| || || || || |||| ||||| Sbjct 64959 CTCATCTTCGATCTCGGTGGTGGTACCTTCGATGTCTCTCTCCTGACCATTGAGGAGGGT 65018 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || || ||||||||||| || | ||||| |||||||| || ||| Sbjct 65019 ATCTTCGAGGTCAAGGCCACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGACAAT 65078 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGA 349950 || || || || || || | || || ||||| ||||| || | ||| || Sbjct 65079 CGCCTGGTCAACCACTTCGTCCAGGAGTTCAAGCG-CAAGCACAAGAAGGATCTTACTTC 65137 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || | | || | || || || | || || || || ||||| |||||| || | || Sbjct 65138 CAACGCCCGTGCTCTCCGCCGTCTCCGTACCGCTTGCGAGCGTGCCAAGCGTACCCTCTC 65197 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 ||| | | || || || ||||| ||||| ||||| || || | ||||||| | Sbjct 65198 GTCTTCCGCTCAGACTTCCATTGAGATTGACTCTCTCTTCGAAGGTATCGATTTCTACAC 65257 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || || || ||||| || || ||||| | || |||||| || || | || ||||| Sbjct 65258 CTCCATCACCCGTGCCCGTTTCGAAGAGCTCTGCCAGGATCTCTTCAGGTCTACCATGGA 65317 Query 350131 TCCTGTGGAAAAAGTATTAAAAGA-TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAG 350189 || || || || | || | || | || | | || | | | ||| | | Sbjct 65318 CCCCGTCGACCGCGTCCTCCGCGACTCTAAGATTGACAAGGCCTCCG-TCCACGAAATCG 65376 Query 350190 TTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTA 350249 | | || |||||||| || |||||||||| | | || || | | || || ||||| | Sbjct 65377 TCCTCGTCGGTGGTTCCACCCGTATTCCAAGA-TCCAGAAGCTCGTTTCGGACTTTTTCA 65435 Query 350250 ATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309 | || ||||| || | ||| || || || ||||| || || || || |||||||| | Sbjct 65436 ACGGAAAAGAGCCCAACAAATCCATCAACCCGGATGAGGCCGTCGCCTACGGTGCTGCCG 65495 Query 350310 TTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAG 350369 | ||||| | || | || || | | || || | | || | | || || | Sbjct 65496 TCCAGGCTGCCATCCTTTCGGGTGACACCTCCTCCAAGACCCAGGAAATCCTCCTGCTCG 65555 Query 350370 ATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTC 350429 | || | || ||||| || || | || ||| | |||| || ||||||| || || Sbjct 65556 ACGTTGCCCCTCTTTCCCTCGGTATCGAGACTGCCGGTGGTGTCATGACTGCCCTGATCA 65615 Query 350430 CTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATC 350489 | || || || | || || || |||||| || | || || || || | || || | Sbjct 65616 AGCGCAACAGCACCATCCCGACCAAGAAGTCCGAATC-TTCTCCACCTTCTCCGACAACC 65674 Query 350490 AGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATA 350549 |||| | || || || || | || ||||| ||||| ||||| || || || || Sbjct 65675 AGCCTGGTGTCCTCATCCAGGTCTACGAGGGTGAGCGTGCCCGCACCAAGGACAACAACT 65734 Query 350550 AACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTG 350609 || || | || || | || ||||| || ||| | || ||||||||||| | Sbjct 65735 TGCTCGGCAAGTTCGAACTTACTGGCATTCCTCCCGCGCC-CGCGGTGTTCCTCAGATCG 65793 Query 350610 AAGTCTCTTTCGATATTGATTCAAATGGTAT 350640 | ||| |||||||| | || | || ||||| Sbjct 65794 AGGTCACTTTCGATTTGGACGCCAACGGTAT 65824 Score = 105 bits (116), Expect = 2e-17 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||||| || |||||| | || || || || || || |||| ||||| | |||| | Sbjct 64307 CCGCTATCGGTATCGATCTTGGAACCACCTACTCCTGCGTTGGTGTTTTCCGTGATGACC 64366 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | ||| | || || ||||| || || ||||| || ||||| || | |||||| || | Sbjct 64367 GTATTGAA-TCATCGCGAATGACCA-GGAAACAGGACCACGCCTTCTTTCGTTGCTTTCA 64424 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCaaaaaatca 349356 |||| ||||| ||| ||||||||||| | ||||| ||||| Sbjct 64425 CCGATACTGAACGTCTGATTGGTGATGCGGCAAAGAATCA 64464 >seq346 Length=29424 Score = 152 bits (168), Expect = 2e-31 Identities = 176/236 (75%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| ||||| |||||||| || || || || || | Sbjct 4919 TTTGCATACCACCACGGAGGCGGAGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGT 4860 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| ||||| || ||||| |||||||| ||||| ||||||| Sbjct 4859 AGTCCGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGAT 4800 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||| | | || |||||||| || || || || || || ||||||| ||| || | Sbjct 4799 CCGGGGGA--TACCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACG 4742 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| ||||| || | ||||| || || || || || || || || |||||| Sbjct 4741 ACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Score = 136 bits (150), Expect = 1e-26 Identities = 172/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| |||||||| | | || ||||| ||||| || || || || |||||||| | Sbjct 5372 TTTACTGTCCACCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGT 5313 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || | || ||||| || || || ||||| ||||| || || ||||| | Sbjct 5312 AATCAGAGAGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGT 5253 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || ||||||||||| || || || ||||| || || | || || | Sbjct 5252 CCGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAG 5193 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || | |||||||| |||| || || || ||||||||||| Sbjct 5192 ACTCAACCTCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCAC-AAAATCTGCAT 5139 Score = 102 bits (112), Expect = 2e-16 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 140577 CGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCT 140636 || ||||||||||| || ||||| |||||||| ||||| ||||| || ||||| || ||| Sbjct 4507 CGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGAGG-ATCCCT 4449 Query 140637 TCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGT 140696 || || || || || ||||| || |||||||| || | || || | ||| || ||||| Sbjct 4448 TCCTTGTCTTGGATCTTAGCCTTGACATTATCGATGGTGTCCGAGGATTCGACCTCAAGA 4389 Query 140697 GTAACTGTCTTTCCGGT 140713 || ||||||||||| Sbjct 4388 GT---GGTCTTTCCGGT 4375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246401350836