Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq346 181 2e-40 seq249 141 2e-28 seq269 123 6e-23 seq4 109 1e-18 >seq346 Length=29424 Score = 181 bits (200), Expect = 2e-40 Identities = 168/212 (79%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| ||||| || || || || || ||||| | || |||||||| ||| Sbjct 5349 AGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCT 5290 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||||||||| || ||||| || || | || ||||| ||| Sbjct 5289 TCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCC 5230 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || |||||||| || ||||| ||| Sbjct 5229 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTC 5170 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | |||||| ||||| | |||||| Sbjct 5169 TTTCCAGTTAAAGTCTTCACAAA-ATCTGCAT 5139 Score = 174 bits (192), Expect = 4e-38 Identities = 161/203 (79%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || |||||||||||||| | || |||| || || Sbjct 5122 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCC 5063 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || || || || || |||| |||||||||||| Sbjct 5062 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATC-GGGGGAATGCCTTCCTTGTCC 5004 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||||||| ||||||||||| ||||| ||| Sbjct 5003 TGAATCTTCGCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTC 4944 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || ||||| || || Sbjct 4943 TTTCCCGTAAGCGTCTTGACGAA 4921 Score = 129 bits (142), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||| || || || |||||||| || |||| ||||| | ||||| Sbjct 4896 AGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 4837 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || || || || || || ||| | | ||||| ||| Sbjct 4836 TCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATCCGGGGGA--TACCTCCTTATCC 4779 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || || || || |||||||| || ||||| ||| Sbjct 4778 TGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACCTCAAGGGTGATGGTC 4719 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| ||||| || || | |||||| Sbjct 4718 TTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Score = 114 bits (126), Expect = 3e-20 Identities = 108/136 (79%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| |||||||| || || ||||| || || || ||||| |||||| | |||||| Sbjct 4504 CCATCTTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGAGGATC-CCTTCC 4446 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| |||||||| || || || ||||||||||| ||| ||| ||||| |||||| Sbjct 4445 TTGTCTTGGATCTTAGCCTTGACATTATCGATGGTGTCCGAGGATTCGACCTCAAGAGTG 4386 Query 211077 ATCGTCTTTCCCGTGA 211092 |||||||| |||| Sbjct 4385 ---GTCTTTCCGGTGA 4373 >seq249 Length=58106 Score = 141 bits (156), Expect = 2e-28 Identities = 161/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || || |||||||| |||||||||| || | || || | |||| ||| Sbjct 56515 ACGAGGTGGAGGGTA-ACTCTTTT-GGATGTTATAGTCGGACAGCGTGCGGCCATTTTCG 56458 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || |||||||| || || || ||||| | || | ||||||||| ||| Sbjct 56457 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGAGCGGGATGTATTCCTTGTCTTGG 56398 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || | || | ||||||||||||| ||||||||||| ||||| ||||| Sbjct 56397 ATCTTGGCCTTGATATTGTTGATGGTGTCAGAGGACTCAACCTCGAGGGTGAT-GTCTTG 56339 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| ||||| || || | ||||||||| Sbjct 56338 CCCGTGAGGGTCTTGACGAAGATCTGCATTTT 56307 >seq269 Length=51757 Score = 123 bits (136), Expect = 6e-23 Identities = 147/196 (75%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 210913 GAAGA--GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||| ||||| || || ||||| || ||||| | |||||||||||| || || ||||| Sbjct 21080 GAAGATGGTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTCCTTCCGTCCTCAAGCTG 21021 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA-ACTCCTTCCTTGTCCTGGATCT 211029 || || |||||||| || ||||| ||||| || ||| || | || || |||||||||| Sbjct 21020 TTTACCGGCGAAGATGAGACGTTGCTGGTCGGGGGGATACAC--TCATTATCCTGGATCT 20963 Query 211030 TTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCG 211089 | | ||||| | | |||| ||| ||||||||||| ||||| | |||||||| Sbjct 20962 TAGACCTAACGTTGCCTACCATGTCCGAGGACTCAACCTCGAGCGTGATAGCCTTTCCCG 20903 Query 211090 TGAGAGTCTTTACAAA 211105 | || ||||| || || Sbjct 20902 TAAGCGTCTTGACGAA 20887 >seq4 Length=583001 Score = 109 bits (120), Expect = 1e-18 Identities = 111/142 (78%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || |||||||| || |||||||| || || || ||||| || ||| |||||| Sbjct 25167 CCATCCTCAAGCTGCTTTCC-GCGAAGATCAGACGCTGCTGGTCCGGGGGATG-CCTTCC 25224 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||| || || || || ||||||||||| ||| || |||||||| ||| Sbjct 25225 TTGTCTTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTG 25284 Query 211077 ATCGTCTTTCCCGTGAGAGTCT 211098 || ||||| |||||||| |||| Sbjct 25285 ATGGTCTTGCCCGTGAGGGTCT 25306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145881126380