Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq346 143 2e-29 seq249 98.7 7e-16 >seq346 Length=29424 Score = 143 bits (158), Expect = 2e-29 Identities = 161/211 (76%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| |||||||| ||||||| || || |||| || Sbjct 5119 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCCTCG 5060 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||||||| | || | |||||||| ||| Sbjct 5059 AGCTGCTTACCGGCGAAGATGAGACGCTGCTGATC-GGGGGAATGCCTTCCTTGTCCTGA 5001 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| |||| ||||| | ||| || ||||| | ||| || |||| Sbjct 5000 ATCTTCGCCTTGACATTGT--CTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCT 4943 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || ||||| ||||| |||||||| Sbjct 4942 TTCCCGTAAGCGTCTTGACGAA-ATTTGCAT 4913 Score = 122 bits (134), Expect = 6e-23 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| || | ||| ||| | || || |||||||| || |||||| Sbjct 4875 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCCGCAAAG 4816 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||||||||| | || | ||| ||||| ||| |||||| ||| | | Sbjct 4815 ATGAGACGCTGCTGATCCG-GGGGATACC-TCCTTATCCTGGATCTTCGCCTTGACGTTG 4758 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || |||| || || ||||| | || || ||||| |||||||||||||| ||| Sbjct 4757 TCAATCGTATCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 4698 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 4697 AAGATTTGCAT 4687 Score = 113 bits (124), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| || || |||||||| | ||| | |||| ||| Sbjct 5346 ACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCC 5287 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 5286 AGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGA 5227 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| || || ||||||| ||| || |||||| Sbjct 5226 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTT 5167 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||| || || ||||| Sbjct 5166 CCAGTTAAAGTCTTCAC-AAAATCTGCAT 5139 >seq249 Length=58106 Score = 98.7 bits (108), Expect = 7e-16 Identities = 138/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 44149 CTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGAT 44208 |||||||||||| || |||| || ||| | | || |||||||| ||||| ||||| Sbjct 56497 CTTTTGGATGTTATAGTCGGACAGCGTGCGGCCATTTTCGAGCTGCTTTCCGGCGAAGAT 56438 Query 44209 CAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCC 44268 || ||||||||| || || | |||||| || ||||| || | || || Sbjct 56437 CAGACGCTGCTGGTCGAGCGGGATGTATTCCTTGTCTTGGATCTT-GGCCTTGATATTGT 56379 Query 44269 T-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | |||||||| | ||| || ||||| | || || ||||| |||||||||||||| |||| Sbjct 56378 TGATGGTGTCAGAGGACTCAACCTCGAGGGTGAT-GTCTTGCCCGTGAGGGTCTTGACGA 56320 Query 44328 AGATTTGCAT 44337 |||| ||||| Sbjct 56319 AGATCTGCAT 56310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT-GTAATCGGCGAGTTGGCGCTCGTCGTC 44187 || ||||| || ||| |||||| |||||||| ||| ||| || ||| | || || Sbjct 56725 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTTGTAGTCGAACAGCGTGCGGCCATCTTC 56666 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||| || || | || | ||||||| || Sbjct 56665 GAGCTGCTTTCCGGCGAAGATCAGACGCTACTAGTCGGGCGGGATGCCTTCCTCGCCCTA 56606 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||||| || || ||||| || || || || || Sbjct 56605 AATCTTAGCCTTGATACTGTCGATAGTGTCGGAAGACTCAACCTCGACGGTGATGGTTTT 56546 Query 44308 TCC-CGTGAGGGTCTTCACGAAG 44329 | | |||||||||||| ||| || Sbjct 56545 TACTCGTGAGGGTCTTGACGGAG 56523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988592398204