Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq346 152 1e-31 seq249 132 1e-25 seq269 120 7e-22 seq4 114 3e-20 seq3 95.1 3e-14 >seq346 Length=29424 Score = 152 bits (168), Expect = 1e-31 Identities = 157/204 (77%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 177926 AATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACAC 177985 || |||||| || || || || ||||| || ||||| |||||||| || ||| ||||| Sbjct 4917 AAATTTCGTCAAGACGCTTACGGGAAAGACTATCACGCTCGAGGTTGAGTCCTCTGACAC 4976 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 || || || ||||| |||||||||||||| ||||| || || ||| | ||||| || Sbjct 4977 GATAGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCG-ATCAGCAGCG 5035 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| || || ||||||| ||||||||||| |||| Sbjct 5036 TCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGGACTCTGTCCGATTATAACATCCA 5095 Query 178106 AAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 5096 GAAGGAGTCCACCCTTCACCTTGT 5119 Score = 152 bits (168), Expect = 1e-31 Identities = 158/206 (77%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| ||| | || ||||| || ||||| || ||||| || || ||| Sbjct 5142 CAGATTTT-GTGAAGACTTTAACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCCGAC 5200 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||||||||| || || || ||||| ||||||||||| Sbjct 5201 ACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCCCCGGACCAGCAG 5260 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| ||||| ||||||||||| | ||||| || | Sbjct 5261 CGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGAAGGACTCTCTCTGATTACAATATT 5320 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 5321 CAGAAGGAATCCACCCTTCACCTTGT 5346 Score = 109 bits (120), Expect = 1e-18 Identities = 107/136 (79%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| ||||| || ||| || ||||| ||| ||| ||||||||||| || ||||| Sbjct 4373 TCACCGGAAAGAC---CACTCTTGAGGTCGAATCCTCGGACACCATCGATAATGTCAAGG 4429 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| || ||||| ||||| || ||||| |||||||| || || ||||| ||||||| Sbjct 4430 CTAAGATCCAAGACAAGGAAGGGAT-CCTCCCGACCAGCAGCGTCTGATCTTTGCCGGAA 4488 Query 178063 AACAGCTCGAAGATGG 178078 | ||||| |||||||| Sbjct 4489 AGCAGCTTGAAGATGG 4504 >seq249 Length=58106 Score = 132 bits (146), Expect = 1e-25 Identities = 147/194 (76%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || ||||| || || ||||| || || || |||||||||||||| || Sbjct 56307 AAAATGC---AGATCTTCGTCAAGACCCTCACGGGCAAGAC-ATCACCCTCGAGGTTGAG 56362 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| ||||||||| | || |||| ||||| || ||||| ||| ||||| | Sbjct 56363 TCCTCTGACACCATCAACAATATCAAGGCCAAGATCCAAGACAAGGAATACATCCCGCTC 56422 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || || |||||||||||||| ||||||||| |||| | || || |||| Sbjct 56423 GACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAAAATGGCCGCACGCTGTCCGAC 56482 Query 178095 TATAACGTCCAAAA 178108 |||||| ||||||| Sbjct 56483 TATAACATCCAAAA 56496 Score = 111 bits (122), Expect = 4e-19 Identities = 146/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCAC-AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 ||| || || ||||| || |||||| |||||| ||||||| || || ||||| |||| Sbjct 56526 CGTCAAGACCCTCACGAGTAAAAACCATCACCGTCGAGGTTGAGTCTTCCGACACTATCG 56585 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | | |||| |||||| ||| | | ||||| ||||| || ||| || | || || | Sbjct 56586 ACAGTATCAAGGCTAAGATTTAGGGCGAGGAAGGCATCCCGCCCGACTAGTAGCGTCTGA 56645 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA-TAACGTCCAAAAA 178109 ||||||||||||| |||||||||||||| | || || ||| || ||| |||| || Sbjct 56646 TCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACGCTGTTCGACTACAAACATCCAGAAG 56705 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || || || || Sbjct 56706 GAGTCCACCCTCCACCTCGT 56725 >seq269 Length=51757 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 |||||||| || || || || ||||| | ||||| |||||||| || ||| |||| Sbjct 20884 ATTTTCGTCAAGACGCTTACGGGAAAGGCTATCACGCTCGAGGTTGAGTCCTCGGACATG 20943 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 | | ||||| | ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 20944 GTAGGCAACGTTAGGTCTAAGATCCAGGATAATGAGTGTATCCCCCCG-ACCAGCAACGT 21002 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 || ||||||||||| |||||||| || || |||||||| ||| | ||||| || |||| Sbjct 21003 CTCATCTTCGCCGGTAAACAGCTTGAGGACGGAAGGACCCTTTCTGATTACAATATCCAG 21062 Query 178107 AAAGAATCAAC 178117 || ||||| || Sbjct 21063 AAGGAATCCAC 21073 >seq4 Length=583001 Score = 114 bits (126), Expect = 3e-20 Identities = 111/140 (79%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 177939 ACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTC 177998 || ||||| || || || |||||||||||||| || ||| ||||||||||| || ||| Sbjct 25304 ACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTC 25245 Query 177999 AAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCC 178058 || || || || ||||| ||||| ||||| ||||||||||| || || ||||||| | Sbjct 25244 AAGGCCAAAATCCAAGACAAGGAAGGCATCCC-CCGGACCAGCAGCGTCTGATCTTCG-C 25187 Query 178059 GGAAAACAGCTCGAAGATGG 178078 ||||| ||||| || ||||| Sbjct 25186 GGAAAGCAGCTTGAGGATGG 25167 >seq3 Length=759389 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035 || || |||| || || |||||||| ||||||||||||| | |||| || || |||| Sbjct 395712 GCACAAACACGATAGACAACGTCAAGGCAAAGATTCAGGACTAGGAAGACATTCCACCGG 395771 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 || |||| || || ||||||||||| || |||||||| || ||||||| |||||| Sbjct 395772 ACTAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAGAGCGGCCGGACTCTGTCCGATT 395831 Query 178096 ATAAC 178100 | ||| Sbjct 395832 ACAAC 395836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724845803928