Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq502 120 4e-22 >seq502 Length=98925 Score = 120 bits (132), Expect = 4e-22 Identities = 432/672 (64%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 |||||||||| | ||| ||||| | | || || || ||||| || |||||||||||| Sbjct 22670 GGACACATCAGAGTCCATTCTCCATTCTTCTCAACACGCTTCATGAACAGATCAGGAATC 22611 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || | || || ||||| | | | ||| || || || ||||||| || Sbjct 22610 CACAAGGCGTAGAAGAGATCACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGGAGG 22551 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 || |||||| | | | ||| | ||||| || || | ||| |||| | | | || || Sbjct 22550 TCAAGGAACTCAAACACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGT 22491 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 | |||||||| |||||||| | |||||| |||||||| || |||| | | ||| || Sbjct 22490 CTCTTGTTTCCACCCTGATCGACGTATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGG 22431 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 54293 | || ||||| || || || || || | || || || | || || || Sbjct 22430 ACGATGCCATTTGAGTTGCCGTTTGTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGG 22371 Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353 | ||| || || || || || || | || || || | || ||| || || | Sbjct 22370 TGGACATT--AAGGCCAATTCCACCAGCATTCTTGGAAATCATAGCACATGTCTTCAATG 22313 Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413 | || ||||| || || || || ||| |||||| || || || ||| ||| | || Sbjct 22312 TGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTT 22253 Query 54414 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 54473 | | || || ||| || | ||| || ||||| || || || || || | | Sbjct 22252 GTGCTTGTGGTGTGCCAGCAGCGAAGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGG 22193 Query 54474 AAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 54533 | | || ||||| |||||||| || || || |||||| | ||||| || || |||| Sbjct 22192 ACATCAGGTTGTAGGTCTCGATCGCAGACTCGATATCCTCTCCGTGAATGCCGACGGCGA 22133 Query 54534 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGG 54593 | ||||| | |||||| || || | || ||||||| | | || | ||| | Sbjct 22132 CCCGCATGATCATGTGTTGTGGACGCTCGCAGATCTTGCCATCGAGACGGAGGAGGTATG 22073 Query 54594 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAAT 54651 | || | || || || || || || | ||| ||||| ||||| ||||| | ||| Sbjct 22072 AACGCTCGAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCTCGATCGTAGACAAT 22015 Query 54652 AACTGAGTTGAG 54663 | |||||||||| Sbjct 22014 AGCTGAGTTGAG 22003 Score = 98.7 bits (108), Expect = 1e-15 Identities = 322/500 (64%), Gaps = 3/500 (1%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| ||||| || || | | ||||| || |||||||| || || || || Sbjct 23867 GTGAATTGAATAGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGG 23808 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | |||| || ||| |||||||| || | || ||||||| || Sbjct 23807 CCCAATTTCCAGCCTGCAAAGTGCATACTGGTGATCTTACCCATGGTCGGATCCTTCATG 23748 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 ||||| ||||| ||||| |||||||||| | || || | |||||| ||||| | | | Sbjct 23747 TGGATGTTCATCGATTGTGATTGATCGATGTAAGCACCACGGTCTGCGGCCATCTGGACG 23688 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || ||| | || ||||| | ||| || || | || || || |||| | Sbjct 23687 ATGGTTCGTTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCTTTGATGTCAGCTGGGATA 23628 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 |||| | |||||||| || |||||||| | || || | ||||| || | ||| | Sbjct 23627 TTTGGGATGTTCTGAATTGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCAGAC 23568 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| | | | | || || || || || |||||||| || ||| Sbjct 23567 CAGAGGCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCA 23508 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | | || | |||| ||| || || || || || || | |||| || || Sbjct 23507 GCAAGAACACGACGAGAGTAGATGTTGGACGTGTATGGCTCAAAGCACTCGTTGAAGCCA 23448 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||| ||| ||||| || || ||||| || || |||| | ||| || | |||||| Sbjct 23447 AGAATCTGACTCGTTGAGGCGGTTGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCG 23388 Query 53285 TATGTTCTGATTTTATCTTT 53304 | | |||||| ||| || Sbjct 23387 TGTTGCTTGATTTGATCCTT 23368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593706378462480