Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq438 102 9e-17 seq491 86.0 7e-12 >seq438 Length=237658 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||| | || |||||||| || ||||| || | |||||| || |||| || Sbjct 145032 ACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCG 145091 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| || ||||| ||||| ||||| ||||| | || | | |||||||| || Sbjct 145092 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCT-TG 145150 Query 43095 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | | |||| |||| | | | || ||| |||||| || |||| ||||| || || Sbjct 145151 AATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTT 145210 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || ||||||||||| Sbjct 145211 TCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 100 bits (110), Expect = 3e-16 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| || || | | ||| | ||||||||| | || |||||| || || ||||| Sbjct 144779 CTATTGGCCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTA 144838 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || || || || | || || | ||||||||||||||| || | || ||||||||| Sbjct 144839 GTCGCTCAATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTC 144898 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTC 43127 | || | | |||||| | | ||| | |||| |||| ||| | | | ||||| | Sbjct 144899 TGGTGGGATACCCTCCTTAT-CTTGAATCTTTGACTTGA-CGTTGTCAATGGTGTCCGAC 144956 Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || | ||||| || ||||| || | ||||| |||||||||||||| Sbjct 144957 GACTCCACCTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 >seq491 Length=357818 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | || || || |||| || || ||||| ||||| || | Sbjct 80210 CCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGA 80269 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | |||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 80270 TCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 80329 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | ||| ||| || ||||| || | ||||| || || ||||| || |||||||||| Sbjct 80330 CGATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAA 80389 Query 43174 AG 43175 || Sbjct 80390 AG 80391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571802940026280