Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq438 104 2e-17 seq491 87.8 1e-12 >seq438 Length=237658 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || ||||||||||||||||| ||| |||| || | |||||||| ||||| Sbjct 145049 TTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAA 145108 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||| ||||| || | | |||||||| |||||| ||| | | Sbjct 145109 GATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACGTT 145168 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||||| ||||||||| || | ||||| || || ||||| || || || || Sbjct 145169 ATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTTCCGGTCAGGGTCTTGAC 145228 Query 34378 AAAGATCTGCAT 34389 ||||| ||||| Sbjct 145229 GAAGATTTGCAT 145240 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | |||| || ||||| |||||||||||| || ||| | || Sbjct 144801 AGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAATGTACGACCATCC 144860 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| || ||||| || | | ||||||||| || | | |||||| || Sbjct 144861 TCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTATCT 144920 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | || | || | ||| || || |||| ||||| || Sbjct 144921 TGAATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAATGTGATTGTC 144980 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || | ||| || |||||||| ||||| Sbjct 144981 TTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 >seq491 Length=357818 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 34195 ACTTT-CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTG 34253 ||||| | ||||| ||||||||||| || || |||| |||| || | ||||| || | Sbjct 80204 ACTTTACCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAG 80263 Query 34254 CGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA 34313 | || || | ||||||||||| ||| | | ||||||||| ||||| ||| | Sbjct 80264 CAAAGATCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGA 80323 Query 34314 GATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTT 34373 || | | |||| ||||| || || || || | ||||| || || || || ||||| | Sbjct 80324 CATTGTCGATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCT 80383 Query 34374 TCACAAAG 34381 | |||||| Sbjct 80384 TTACAAAG 80391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323063924310560