Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq502 268 8e-67 seq438 123 2e-23 seq476 122 8e-23 seq1523 96.9 3e-15 >seq502 Length=98925 Score = 268 bits (296), Expect = 8e-67 Identities = 634/951 (67%), Gaps = 5/951 (1%) Strand=Plus/Minus Query 23028 AGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATA 23087 || |||| ||||| || || ||||| ||| | ||||| || || |||||||| | Sbjct 22953 AGCCAAG-TTGCAGACTGCAACCTCATCTGGAGCACAATACTCGACGATCTCGGTACAGA 22895 Query 23088 GATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147 | ||| | || || |||| || ||||||||||||||| ||||| | ||||| Sbjct 22894 GGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTTTTTCTGTTGCAAGCATCCT 22835 Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207 |||| | |||| | || | || ||||| ||| | ||| | || | ||| | Sbjct 22834 TGTACAACATGAAAGGGTTTCCGGTCTCAGTCTGTGCCTCCAGAATGGAATACCAGAGCT 22775 Query 23208 TCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 ||||||| | | || || ||| ||||| ||||||||| | ||| | || Sbjct 22774 TCTGAGCCTTGATG-GTTTTGCGACCCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCC 22716 Query 23267 TCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || ||||| | ||||| ||| || || ||||| || | | | |||||||| ||| | Sbjct 22715 TCGAATTCATCGCCGTAGACA-TCAGCTAGGCCTGGGCACTCGTTGGGACACATCAGAGT 22657 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 ||| | | || ||||| || |||| || ||||| || ||||| | |||||||| Sbjct 22656 CCATTCTCCATTCTTCTCAACACGCTTCATGAACAGATCAGGAATCCACAAGGCGTAGAA 22597 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || || || || || || || |||||| |||||| | || | || || || Sbjct 22596 GAGATCACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGGAGGTCAAGGAACTCAAA 22537 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 ||| || || ||||| ||||||||||| | ||| || || ||||||||||| || || || Sbjct 22536 CACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGTCTCTTGTTTCCACC 22477 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 |||||||||||| | ||| ||||||||| | || | ||||| || |||| || || || Sbjct 22476 CTGATCGACGTATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGGACGATGCCATTTGA 22417 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 |||| | || || | | ||| | || || | ||| || | | || Sbjct 22416 GTTGCCGTTTGTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGGTGGACATTAAGGCC 22357 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || | || || ||||| || ||| |||| ||||||||||| || || Sbjct 22356 AATTCCACCAGCATTCTTGGAAATCATAGCACATGTCTTCAATGTGTCGTAGATACCGTC 22297 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 |||| |||||| || | | | || ||| || ||||| | ||| |||| || || | Sbjct 22296 GATGGAGTCCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGCC 22237 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || | ||| || |||||| || || || ||| | | ||||| || ||||| || Sbjct 22236 AGCAGCGAAGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGGACATCAGGTTGTAGGT 22177 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 ||||| || | || || ||||||||||| || |||| |||||| ||||| ||||||| Sbjct 22176 CTCGATCGCAGACTCGATATCCTCTCCGTGAATGCCGACGGCGACCCGCATGATCATGTG 22117 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 ||| || | |||| | ||| | | || || |||||||| | | || || Sbjct 22116 TTGTGGACGCTCGCAGATCTTGCCATCGAGACGGAGGAGGTATGAACGCTCGAGGGTCTT 22057 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || || || || | ||||| || || ||||||| || || || || || Sbjct 22056 GAAGCCGAAGTATTGGTAGTTGAAATCTCGATCGTAGACAATAGCTGAGTT 22006 >seq438 Length=237658 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| || || || |||||| |||| || ||| ||||| Sbjct 145240 ATGCAAATCTTCGTCAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCC 145181 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || ||| | | |||||||||| | || || ||||| Sbjct 145180 GATACCATCGATAACGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCAGACCA 145122 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||| ||||| || | |||||| ||| || ||| || || Sbjct 145121 ACAGCGCCTCATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACAA 145062 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| || |||||| |||| ||| | || | || |||| Sbjct 145061 CATCCAAAAGGAATCTACGCTTCATTTGGTTCTTCGTCTTCGTGGTGGTA 145012 >seq476 Length=728557 Score = 122 bits (134), Expect = 8e-23 Identities = 570/905 (63%), Gaps = 69/905 (8%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || ||||| || ||||||| ||||| | || || Sbjct 287835 ATCTGGCAGATGTACAAGAAGGCTGAGGCATCTTTCTGGACCGCAGAAGAGATTGATCTT 287894 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| || | ||||| || ||| | |||||||| Sbjct 287895 TCCAAGGATCTTCACGACTGGAATAACAAACTCAACGATGACGAGCGCTATTTTATTTCC 287954 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||| || || || || |||||||| | || || | Sbjct 287955 CACGTCCTCGCTTTCTTCGCCGCATCTGACGGAATCGTCAACGAGAACCTTGTTGAGCGC 288014 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || || || | | ||||| | ||||| ||||| || ||| | || Sbjct 288015 TTCAGTGGTGAGGTCCAGATTCCTGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATG 288074 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || |||||||| || || | ||||| | | Sbjct 288075 GAGAACATCCACTCCGAGACATACTCTCTCCTCATCGACACATATATCAAGGAGCAGGCT 288134 Query 57867 GAGAA-ACGTAGACTGTTCAACGCGATCGAAA----------------CAATG------- 57902 |||| || || || |||||||| || || | ||||| Sbjct 288135 CAGAAGACTTA-CCTTTTCAACGCTATTGACACCAGTATGTCCCAATCCAATGTACTTAT 288193 Query 57903 -------------CCCGCGATCGCC------------AAGAAGGCAGAGTGGTCAATCAA 57937 | |||||| | | |||||||| || ||| | ||| Sbjct 288194 ATTCCTATTCTAACGCGCGATAGTCCCTTGCATCAAGAAGAAGGCCGATTGGGCTGTCAG 288253 Query 57938 ATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGT 57994 |||||| || | || || |||| || || | | || |||| ||||| || || Sbjct 288254 ATGGATCCAA---GACAAGGACTCCACCTTTGCTCAACGTCTTGTCGCATTCGCTGCTGT 288310 Query 57995 CGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 ||| ||||| |||||| ||| || || | || || ||| ||||||| |||||||| Sbjct 288311 CGAGGGTATCTTCTTTAGTGGCTCTTTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGCCT 288370 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||| | || || || || ||| ||| | || || || || ||||||||||| || || Sbjct 288371 CATGGCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTGATGAGGGTCTCCACACCGA 288430 Query 58115 TTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA--ACCGACGCGGGATCGCA-TCTT 58171 ||||| ||||| | | || ||| ||| || | || | || || ||| || Sbjct 288431 CTTTGCCTGCCTTCTCTTTTCCCAC-TTG--AAGCACCGCCCAAGCAAGAAGGCAGTCCA 288487 Query 58172 GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGT 58231 || | || |||||||| || | ||||||| | ||||| | || || || || || Sbjct 288488 AGATGTAATTACCGAGGCTGTTGAGATCGAACAGGAGTTCTTGACTGAGGCTCTTCCTTG 288547 Query 58232 GGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAG 58291 || | ||||| |||||| | ||| ||||||| |||||||| || ||| | Sbjct 288548 CGCTCTTCTCGGCATGAACTCCACCCTCATGAAGCAGTACATCGAGTTTGTCGCTGACCG 288607 Query 58292 ACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTT 58349 || | || | || | |||| ||| ||||| | || || || || || Sbjct 288608 TCTGCTCCTTGCTCTTGGCAACGAGAAGGTC--TACAAGTCCGCCAACCCATTCGACTTC 288665 Query 58350 ATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATAT 58409 ||| | |||||||| | |||||||| ||||| ||||| || ||| |||| || Sbjct 288666 ATGGAAAACATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTAC 288725 Query 58410 CAAAA 58414 ||||| Sbjct 288726 CAAAA 288730 >seq1523 Length=724860 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || |||||| |||| || || |||| || | ||| Sbjct 229943 TCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCG 230002 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | ||||| | || ||||||||| || | || || |||||||| || || | Sbjct 230003 ACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGA 230062 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| || | |||||| || | |||||| ||||| ||||| | Sbjct 230063 TCTTCGCTGGCAAGCAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGG 230122 Query 31383 AATCGACTCTTCATCTGGTACTT 31405 | || ||||||||||| || ||| Sbjct 230123 AGTCCACTCTTCATCTCGTCCTT 230145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445754971663920