Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq502 134 2e-26 >seq502 Length=98925 Score = 134 bits (148), Expect = 2e-26 Identities = 368/562 (65%), Gaps = 4/562 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 |||||||||| | ||| ||||| | | || || || ||||| || |||||||||||| Sbjct 22670 GGACACATCAGAGTCCATTCTCCATTCTTCTCAACACGCTTCATGAACAGATCAGGAATC 22611 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || | || || ||||| | | | ||| || || || ||||||| || Sbjct 22610 CACAAGGCGTAGAAGAGATCACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGGAGG 22551 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || |||||| | | | ||| | ||||| || || | ||| ||||| | | | || || Sbjct 22550 TCAAGGAACTCAAACACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGT 22491 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 | |||||||| |||||||| | |||||| |||||||| || |||| | | ||| || Sbjct 22490 CTCTTGTTTCCACCCTGATCGACGTATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGG 22431 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--AT 63531 | || || ||||| | || || || || | || || | || | || || || Sbjct 22430 ACGATGCCATTTGAGTTGCCGTTTGTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGG 22371 Query 63532 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63591 | ||| || || ||||| || || | || || || | || ||| || || | Sbjct 22370 TGGACATT--AAGGCCAATTCCACCAGCATTCTTGGAAATCATAGCACATGTCTTCAATG 22313 Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63651 |||| ||||| || || ||| || || |||||| || || || ||| ||| | || Sbjct 22312 TGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTT 22253 Query 63652 GGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63711 | | | || || ||| || | ||| || ||||| || || || || || | | Sbjct 22252 GTGCTTGTGGTGTGCCAGCAGCGAAGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGG 22193 Query 63712 AAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 63771 | | || ||||| ||||| || || || || |||||| | ||||| || || |||| Sbjct 22192 ACATCAGGTTGTAGGTCTCGATCGCAGACTCGATATCCTCTCCGTGAATGCCGACGGCGA 22133 Query 63772 CACGCATTAACATGTGCTGAGG 63793 | ||||| | |||||| || || Sbjct 22132 CCCGCATGATCATGTGTTGTGG 22111 Score = 102 bits (112), Expect = 1e-16 Identities = 336/522 (64%), Gaps = 3/522 (1%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| ||||| || || | | ||||| || |||||||| || || || || Sbjct 23867 GTGAATTGAATAGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGG 23808 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || ||| |||||||| || | || ||||||| || Sbjct 23807 CCCAATTTCCAGCCTGCAAAGTGCATACTGGTGATCTTACCCATGGTCGGATCCTTCATG 23748 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 ||||| ||||| ||||| |||||||||| | || || | |||||| ||||| | | | Sbjct 23747 TGGATGTTCATCGATTGTGATTGATCGATGTAAGCACCACGGTCTGCGGCCATCTGGACG 23688 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || ||| | || ||||| | ||| || || | || || || |||| | Sbjct 23687 ATGGTTCGTTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCTTTGATGTCAGCTGGGATA 23628 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 |||| | |||||||| || |||||||| | || || | ||||| || | ||| | Sbjct 23627 TTTGGGATGTTCTGAATTGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCAGAC 23568 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| | | | | || || ||||| || ||||| || || ||| Sbjct 23567 CAGAGGCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCA 23508 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | |||| ||| || || || || || || | |||| || || Sbjct 23507 GCAAGAACACGACGAGAGTAGATGTTGGACGTGTATGGCTCAAAGCACTCGTTGAAGCCA 23448 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | ||| ||| ||||| || || ||||| || || |||| | ||| || | |||||| Sbjct 23447 AGAATCTGACTCGTTGAGGCGGTTGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCG 23388 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGA 62564 | | |||||| ||| || | | ||||| | ||| ||| Sbjct 23387 TGTTGCTTGATTTGATCCTTCACCTCGTCCCAGTCCCAGAGA 23346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629801453051280