Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq502 95.1 1e-14 >seq502 Length=98925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 371/580 (64%), Gaps = 10/580 (2%) Strand=Plus/Minus Query 37969 CCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATA 38028 ||||| || ||| |||||||| |||| ||||||| ||| || || || || | ||| Sbjct 22685 CCTGGGCACTCGTTGGGACACATCAGAGTCCATTCTCCATTCTTCTCAACACGCTTCATG 22626 Query 38029 AATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 || | |||||| | ||| || || ||| || | ||| | | |||||| || || Sbjct 22625 AACAGATCAGGAATCCACAAGGC-GTAGAAGAGATCACGAGCACGGACTTCTTCCTTGCC 22567 Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147 |||||||| | | || || || || | ||| ||||||||||| || | || || Sbjct 22566 GTGATTCTTTCGGAGGTCAAGGAACTCAAACACATCGGCGTGCCATGGCTCGAGGTAGAT 22507 Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207 | | || || ||||| || | || ||||||| | ||||| | ||||| || | Sbjct 22506 GGCGAAAGCACCCGGTCTCTTGTTTCCACCCTGATCGACGTATCTGGCGGTGTTGTTGAA 22447 Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267 | | | ||| || || || ||||| || ||||||||| | || | || |||| ||| Sbjct 22446 AACACGAAGCATGGGGACGATGCCATTTGAGTTGCCGTTTGTTCCAGCAATGTAAGCACC 22387 Query 38268 CTTAGCTCGTATATTACTTATCGACAAT----CCTATTCCACCTGCATGTTTTGATATTA 38323 | || || || | |||| | || |||||||| |||| || || || | Sbjct 22386 GGTCGCGCGGAT----TCGGTGGACATTAAGGCCAATTCCACCAGCATTCTTGGAAATCA 22331 Query 38324 AAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTA 38383 ||| ||| || || || || | ||||| || || ||| ||||| || | | Sbjct 22330 TAGCACATGTCTTCAATGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGTCAATCA 22271 Query 38384 TAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCAT 38443 || || ||| | ||| | ||| || || || || | || || || |||| Sbjct 22270 GGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGCCAGCAGCGAAGAGGGTCGGGGAAGCAT 22211 Query 38444 GTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGC 38503 || |||| || || | |||| || || || || || || || ||||| | | Sbjct 22210 GTGTGAAGCACTTCTGGGACATCAGGTTGTAGGTCTCGATCGCAGACTCGATATCCTCTC 22151 Query 38504 CGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 ||||||| || | | |||| ||| | ||| |||||||| Sbjct 22150 CGTGAATGCCGACGGCGACCCGCATGATCATGTGTTGTGG 22111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468512788195440