Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq502 116 5e-21 >seq502 Length=98925 Score = 116 bits (128), Expect = 5e-21 Identities = 507/794 (64%), Gaps = 16/794 (2%) Strand=Plus/Minus Query 65817 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 65876 ||||| || | || | || || || ||| |||| || |||||||| || | ||||| Sbjct 22880 ATGGTACCCAGGTTCTTCTGGTTGCTTTTTCTGTTGCAAGCATCCTTGTACAACATGAAA 22821 Query 65877 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 65935 || | || || ||| |||| | || | ||| | | ||||| | || ||||||| || Sbjct 22820 GGGTTTCCGGTCTCAGTCTGTGCCTCCAGAATGGAATACCAGA-GCTTCTGAGCCTTGAT 22762 Query 65936 TATAGATTTGTATCTCTTTTCT---CTTTCGTA--TAGTGTATACAATCGTTCGAACTCG 65990 | |||| | |||| || | ||||| | ||| | | | ||||| || Sbjct 22761 GGT---TTTGCGACCCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCC--TCGAATTCA 22707 Query 65991 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 66050 || || | |||| | | || || || || | |||||||||| | ||| ||||| Sbjct 22706 TCGCCGTAGACATCAGCTAGGCCTGGGCACTCGTTGGGACACATCAGAGTCCATTCTCCA 22647 Query 66051 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTG 66110 | | || || || ||||| || |||||||||||||| | || || | ||| | Sbjct 22646 TTCTTCTCAACACGCTTCATGAACAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGA 22587 Query 66111 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAA 66170 | | ||| || || || ||||||| || || |||||| | | | ||| Sbjct 22586 GCACGGACTTCTTCCTTGCCGTGATTCTTTCGGAGGTCAAGGAACTCAAACACATCGGCG 22527 Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || || | ||| ||||| | | | || || | |||||||| |||||||| | | Sbjct 22526 TGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGTCTCTTGTTTCCACCCTGATCGACG 22467 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 ||||| |||||||| || |||| | | ||| || | || ||||| || | || || Sbjct 22466 TATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGGACGATGCCATTTGAGTTGCCGTTT 22407 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 66348 || || | || || || | || || || | ||| || || ||||| | Sbjct 22406 GTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGGTGGACATT--AAGGCCAATTCCAC 22349 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 66408 | || | || || || | || ||| || || || || ||||| || || || | Sbjct 22348 CAGCATTCTTGGAAATCATAGCACATGTCTTCAATGTGTCGTAGATACCGTCGATGGAGT 22289 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 66468 | ||| |||||| || || || ||| ||| | ||| | || || ||| | Sbjct 22288 CCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGCCAGCAGCGA 22229 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 66528 | | ||| || ||||| || || || || || | || | || ||||| ||||| || | Sbjct 22228 AGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGGACATCAGGTTGTAGGTCTCGATCG 22169 Query 66529 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 66588 | || || |||||| | ||||| || || ||||| ||||| | |||||| || || | Sbjct 22168 CAGACTCGATATCCTCTCCGTGAATGCCGACGGCGACCCGCATGATCATGTGTTGTGGAC 22109 Query 66589 TTTCAACGATCTTG 66602 || ||||||| Sbjct 22108 GCTCGCAGATCTTG 22095 Score = 102 bits (112), Expect = 1e-16 Identities = 323/500 (65%), Gaps = 3/500 (1%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| ||||| || || | | ||||| || |||||||| || || || || Sbjct 23867 GTGAATTGAATAGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGG 23808 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||| |||||||| || | || ||||||| || Sbjct 23807 CCCAATTTCCAGCCTGCAAAGTGCATACTGGTGATCTTACCCATGGTCGGATCCTTCATG 23748 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 ||||| ||||| ||||| |||||||||| | || || | |||||| ||||| | | | Sbjct 23747 TGGATGTTCATCGATTGTGATTGATCGATGTAAGCACCACGGTCTGCGGCCATCTGGACG 23688 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || ||| | || ||||| | ||| || || | || || || |||| | Sbjct 23687 ATGGTTCGTTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCTTTGATGTCAGCTGGGATA 23628 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 |||| | |||||||| || |||||||| || || || | ||||| || | ||| | Sbjct 23627 TTTGGGATGTTCTGAATTGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCAGAC 23568 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| | | | | || || || || || |||||||| || ||| Sbjct 23567 CAGAGGCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCA 23508 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | |||| ||| || || || || || || | |||| || || Sbjct 23507 GCAAGAACACGACGAGAGTAGATGTTGGACGTGTATGGCTCAAAGCACTCGTTGAAGCCA 23448 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | ||| ||| ||||| || || ||||| || || |||| | ||| || | |||||| Sbjct 23447 AGAATCTGACTCGTTGAGGCGGTTGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCG 23388 Query 65316 TATGTTCTGATTTTATCTTT 65335 | | |||||| ||| || Sbjct 23387 TGTTGCTTGATTTGATCCTT 23368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658155926094840