Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq438 84.2 2e-11 >seq438 Length=237658 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| || | | ||||||||||| ||| |||||| || | ||||| ||| Sbjct 144785 GCCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 144844 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||||||||| | || ||||| || || || || || ||||||| ||| || || | || Sbjct 144845 CAATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGG 144904 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTC 43058 | ||| || || || ||| | || | ||||| || ||| ||||| | ||| Sbjct 144905 GATACCCTCCTTATC-TTGA--ATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTC 144961 Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || || || || || | ||| || ||||| |||||||| Sbjct 144962 CACCTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381360067070958