Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq502 122 1e-22 >seq502 Length=98925 Score = 122 bits (134), Expect = 1e-22 Identities = 384/593 (65%), Gaps = 4/593 (1%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 || || || || || |||||||||| | ||| ||||||| | | || || ||||| Sbjct 22685 CCTGGGCACTCGTTGGGACACATCAGAGTCCATTCTCCATTCTTCTCAACACGCTTCATG 22626 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || |||||||||||||| | || || ||||| | | | || || || || Sbjct 22625 AACAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGAGCACGGACTTCTTCCTTGCCG 22566 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||||| || || |||||| | | | ||| | ||||| || || | ||| ||| Sbjct 22565 TGATTCTTTCGGAGGTCAAGGAACTCAAACACATCGGCGTGCCATGGCTCGAGGTAGATG 22506 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | | ||||| | |||||||| |||||||| | |||||| |||||||| || || Sbjct 22505 GCGAAAGCACCCGGTCTCTTGTTTCCACCCTGATCGACGTATCTGGCGGTGTTGTTGAAA 22446 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | | ||| || | || ||||| || || || || || | || || || Sbjct 22445 ACACGAAGCATGGGGACGATGCCATTTGAGTTGCCGTTTGTTCCAGCAATGTAAGCACCG 22386 Query 72274 CTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 | || || || || ||| || || ||||| || || | || || || | | Sbjct 22385 GTCGCGCGGATTCGGTGGACATT--AAGGCCAATTCCACCAGCATTCTTGGAAATCATAG 22328 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 | ||| || || || || ||||| || || || || ||| |||||| || || | Sbjct 22327 CACATGTCTTCAATGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGTCAATCAGGA 22268 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 | ||| ||| | ||| | || || ||| || | ||| || ||||| || | Sbjct 22267 AGCAGGAAGAGAGTTGTGCTTGTGGTGTGCCAGCAGCGAAGAGGGTCGGGGAAGCATGTG 22208 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 72511 | || || || | |||| || ||||| ||||| || || || || |||||| | | Sbjct 22207 TGAAGCACTTCTGGGACATCAGGTTGTAGGTCTCGATCGCAGACTCGATATCCTCTCCGT 22148 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 | || || || ||||| ||||| | ||| || || || | || ||||||| Sbjct 22147 GAATGCCGACGGCGACCCGCATGATCATGTGTTGTGGACGCTCGCAGATCTTG 22095 Score = 98.7 bits (108), Expect = 1e-15 Identities = 312/483 (65%), Gaps = 3/483 (1%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| |||| || || || | ||||| || ||||||||||| || || || Sbjct 23867 GTGAATTGAATAGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGG 23808 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || | |||| || ||| |||||||| || | || | | ||||| ||| Sbjct 23807 CCCAATTTCCAGCCTGCAAAGTGCATACTGGTGATCTTACCCATGGTCGGATCCTTCATG 23748 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || |||||||| || |||||||||| | || || | |||||| ||||| | | | Sbjct 23747 TGGATGTTCATCGATTGTGATTGATCGATGTAAGCACCACGGTCTGCGGCCATCTGGACG 23688 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || || ||| | || ||||| | ||| || || | || || || |||| | Sbjct 23687 ATGGTTCGTTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCTTTGATGTCAGCTGGGATA 23628 Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 |||| | |||||||| || |||||||| || || || | || || || | ||| | Sbjct 23627 TTTGGGATGTTCTGAATTGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCAGAC 23568 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157 || | | ||| | | | | || || || || || |||||||| || ||| Sbjct 23567 CAGAGGCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCA 23508 Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217 | | || | ||||| ||| || || || || || || | |||| || || Sbjct 23507 GCAAGAACACGACGAGAGTAGATGTTGGACGTGTATGGCTCAAAGCACTCGTTGAAGCCA 23448 Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277 | ||| ||| ||||| || || ||||| || || |||| ||||| || | ||||| Sbjct 23447 AGAATCTGACTCGTTGAGGCGGTTGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCG 23388 Query 71278 TGT 71280 ||| Sbjct 23387 TGT 23385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671121993668760