Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq438 105 7e-18 >seq438 Length=237658 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||| ||||||| |||||||| ||||| |||||||| ||| | Sbjct 145014 CCACCACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGAC 145073 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||||||||| || || || |||| || || || || || || || Sbjct 145074 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGG 145133 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| ||| || | | || | || || | | ||| ||| Sbjct 145134 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACT 145193 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| ||||||| || || ||||| ||||||||| Sbjct 145194 TCGAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATA 145241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507001401418320