Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq476 125 1e-23 >seq476 Length=728557 Score = 125 bits (138), Expect = 1e-23 Identities = 200/282 (71%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||||| |||| || || ||||| | |||||| | ||||| Sbjct 287835 ATCTGGCAGATGTACAAGAAGGCTGAGGCATCTTTCTGGACCGCAGAAGAGATTGATCTT 287894 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | | | || ||||| | ||||| || Sbjct 287895 TCCAAGGATCTTCACGACTGGAATAACAAACTCAACGATGACGAGCGCTATTTTATTTCC 287954 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| || || |||||||||||||| || || ||||| || Sbjct 287955 CACGTCCTCGCTTTCTTCGCCGCATCTGACGGAATCGTCAACGAGAACCTTGTTGAG-CG 288013 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| | ||| | ||||| |||| ||| ||||| ||||| ||||||||||||| Sbjct 288014 CTTCAGTGGTGAGGTCCAGATTCCTGAGGC-TCGCTGCTTCTACGGTTTCCAAATCATGA 288072 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 | |||||| | ||||| || | |||||| || || |||| Sbjct 288073 TGGAGAACATCCACTCCGAGACATACTCTCTCCTCATCGACA 288114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741040201094760