Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq438 89.7 4e-13 >seq438 Length=237658 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| ||| |||||| || ||||||||||| | || || || ||||||| |||| Sbjct 145546 ATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCG-AAAGGGTGCGACCGTCCTCGAGCT 145604 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| || | || |||||||| ||||| || | | |||||||||| || | Sbjct 145605 GCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCT 145664 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | |||||||| | ||||| ||||| || ||||| || |||| Sbjct 145665 TGGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGG 145724 Query 48702 TGA 48704 ||| Sbjct 145725 TGA 145727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421240670168051