Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1743 131 3e-26 >seq1743 Length=229212 Score = 131 bits (144), Expect = 3e-26 Identities = 138/179 (77%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 8541 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCTGCGAT 8483 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| | || | || |||| || |||| Sbjct 8482 CCGGCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCAGCCATGATCTACGAGGAGAC 8423 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| |||| | |||| ||||||| || || || | ||| ||| || |||||||| Sbjct 8422 CCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATTCGTGACGCTGTCACCTATACCG 8364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073324756343