Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq502 131 2e-25 seq476 93.3 5e-14 >seq502 Length=98925 Score = 131 bits (144), Expect = 2e-25 Identities = 510/794 (64%), Gaps = 16/794 (2%) Strand=Plus/Minus Query 62828 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 62887 ||||| || | || | || || || ||| |||| || |||||||| || | ||||| Sbjct 22880 ATGGTACCCAGGTTCTTCTGGTTGCTTTTTCTGTTGCAAGCATCCTTGTACAACATGAAA 22821 Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 62946 || | || || ||| |||| | || | ||| | | ||||| | || ||||||| || Sbjct 22820 GGGTTTCCGGTCTCAGTCTGTGCCTCCAGAATGGAATACCAGA-GCTTCTGAGCCTTGAT 22762 Query 62947 TATAGATTTGTATCTCTTTTCT---CTTTCGTA--TAGTGTATACAATCGTTCGAACTCG 63001 | |||| | |||| || | ||||| | ||| | | | ||||| || Sbjct 22761 GGT---TTTGCGACCCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCC--TCGAATTCA 22707 Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 || || | |||| | || || || || || | |||||||||| | ||| ||||| Sbjct 22706 TCGCCGTAGACATCAGCTAGGCCTGGGCACTCGTTGGGACACATCAGAGTCCATTCTCCA 22647 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121 | | || || || ||||| || |||||||||||||| | || || ||||| | Sbjct 22646 TTCTTCTCAACACGCTTCATGAACAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGA 22587 Query 63122 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63181 | | ||| || || || ||||||| || || |||||| | | | ||| | Sbjct 22586 GCACGGACTTCTTCCTTGCCGTGATTCTTTCGGAGGTCAAGGAACTCAAACACATCGGCG 22527 Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241 ||||| || || | ||| ||||| | | | || || | |||||||| |||||||| | | Sbjct 22526 TGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGTCTCTTGTTTCCACCCTGATCGACG 22467 Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 ||||| |||||||| || |||| | | ||| || | || ||||| || | || || Sbjct 22466 TATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGGACGATGCCATTTGAGTTGCCGTTT 22407 Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 63359 || || | || || || | || || || | ||| || || ||||| | Sbjct 22406 GTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGGTGGACATT--AAGGCCAATTCCAC 22349 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | || || || | || ||| || || || || ||||| || || || | Sbjct 22348 CAGCATTCTTGGAAATCATAGCACATGTCTTCAATGTGTCGTAGATACCGTCGATGGAGT 22289 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 | ||| |||||| || || || ||| ||| | ||| | || || ||| | Sbjct 22288 CCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGCCAGCAGCGA 22229 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | | ||| || ||||| || || || || || | || | || ||||| ||||| || | Sbjct 22228 AGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGGACATCAGGTTGTAGGTCTCGATCG 22169 Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599 | || || |||||| | ||||| || || ||||| ||||| | |||||| || || | Sbjct 22168 CAGACTCGATATCCTCTCCGTGAATGCCGACGGCGACCCGCATGATCATGTGTTGTGGAC 22109 Query 63600 TTTCAACGATCTTG 63613 || ||||||| Sbjct 22108 GCTCGCAGATCTTG 22095 Score = 98.7 bits (108), Expect = 1e-15 Identities = 322/500 (64%), Gaps = 3/500 (1%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| ||||| || || | | ||||| || |||||||| || || || || Sbjct 23867 GTGAATTGAATAGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCAGTCTTCAGG 23808 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | |||| || ||| |||||||| || | || ||||||| || Sbjct 23807 CCCAATTTCCAGCCTGCAAAGTGCATACTGGTGATCTTACCCATGGTCGGATCCTTCATG 23748 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 ||||| ||||| ||||| |||||||||| | || || | |||||| ||||| | | Sbjct 23747 TGGATGTTCATCGATTGTGATTGATCGATGTAAGCACCACGGTCTGCGGCCATCTGGACG 23688 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || ||| | || ||||| | ||| || || | || || || |||| | Sbjct 23687 ATGGTTCGTTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCTTTGATGTCAGCTGGGATA 23628 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 |||| | |||||||| || |||||||| || || || | ||||| || | ||| | Sbjct 23627 TTTGGGATGTTCTGAATTGAACCACCATCAGCGATGATACGGTTCTTCATGTTGTCAGAC 23568 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | | | || || || || || |||||||| || ||| Sbjct 23567 CAGAGGCCCATGTCGACAAGATCCTTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCA 23508 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | | || | |||| ||| || || || || || || | |||| || || Sbjct 23507 GCAAGAACACGACGAGAGTAGATGTTGGACGTGTATGGCTCAAAGCACTCGTTGAAGCCA 23448 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | ||| ||| ||||| || || ||||| || || |||| | ||| || | |||||| Sbjct 23447 AGAATCTGACTCGTTGAGGCGGTTGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCG 23388 Query 62327 TATGTTCTGATTTTATCTTT 62346 | | |||||| ||| || Sbjct 23387 TGTTGCTTGATTTGATCCTT 23368 >seq476 Length=728557 Score = 93.3 bits (102), Expect = 5e-14 Identities = 198/294 (67%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 || || | |||||| || || | ||| || | || || || ||||| || || Sbjct 288127 TCCTTGATATATGTGTCGATGAGGAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATG 288068 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041 ||||| || ||||||||||| | |||||| | |||||| || || || || || || Sbjct 288067 ATTTGGAAACCGTAGAAGCAGCGAGCCTCAGGAATCTGGACCTCACCACTGAAGCGCTCA 288008 Query 33042 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33101 | | || || || || ||||||||| || || || || || | || || ||| Sbjct 288007 ACAAGGTTCTCGTTGACGATTCCGTCAGATGCGGCGAAGAAAGCGAGGACGTGGGAAATA 287948 Query 33102 AAATATTTTTCGTC----TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATC 33157 ||||| ||||| | | ||| | |||||||| || | | ||| || || | ||| Sbjct 287947 AAATAGCGCTCGTCATCGTTGAGTTTG-TTATTCCAGTCGTGAAGATCCTTGGAAAGATC 287889 Query 33158 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 | ||||| | ||||| || |||||||| ||||| || ||||| | |||||| Sbjct 287888 AATCTCTTCTGCGGTCCAGAAAGATGCCTCAGCCTTCTTGTACATCTGCCAGAT 287835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633615755259600