Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq438 141 8e-29 seq1523 91.5 1e-13 >seq438 Length=237658 Score = 141 bits (156), Expect = 8e-29 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||||| || | ||||| ||||||| || ||||| Sbjct 145240 ATGCAAATCTTCGTCAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCC 145181 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| | || | ||| |||| | ||| ||||| ||||| || ||||| |||| Sbjct 145180 GATACCATCGA-TAACGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCACCAGACC 145123 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| ||| | ||||| | |||||| || ||| |||| Sbjct 145122 AACAGCGCCTCATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACA 145063 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| ||||| ||||| ||||| || || Sbjct 145062 ACATCCAAAAGGAATCTACGCTTCATTTGGTTCT 145029 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | |||||| | || ||||||||||| Sbjct 145012 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAGGTGGAGTCGTCG 144953 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||| | ||| || || || || || ||||| ||||| Sbjct 144952 GACACCATTGACAACGTCAAGTCAAAGATTCA-AGATAAGGAGGGTATCCCACCAGACCA 144894 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || || || || || || || || |||| ||| || || |||| ||||| Sbjct 144893 GCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGTACATTGAGCGACTACAA 144834 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || ||||| ||||| Sbjct 144833 CATCCAGAAGGAGTCTACTCTCCATTTGGTGCT 144801 >seq1523 Length=724860 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | || || || | ||||| |||| |||||||||||||| || ||||| Sbjct 229945 GTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCGA- 230003 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || || ||||| ||||| || || | | Sbjct 230004 -CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGA 230062 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | || || ||||| ||| | ||||| | || || | ||||||||| || ||||| | Sbjct 230063 TCTTCGCTGGCAAGCAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGG 230122 Query 25189 AATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 | ||||| || ||| | || || | || | |||||| Sbjct 230123 AGTCCACTCTTCATCTCGTCCTTCGTCTTCGTGGAGGA 230160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317168289565