Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq438 140 3e-28 seq1523 100 2e-16 seq491 89.7 4e-13 >seq438 Length=237658 Score = 140 bits (154), Expect = 3e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || ||||||| ||||| || || ||||||| | ||| | |||| Sbjct 145444 ACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCGACAACGTCAAGAGC 145385 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || |||||||||||||| |||||||| || ||||||||||||||||| || || || || Sbjct 145384 AAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTATCTTCGCTGGAAAG 145325 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | || ||| ||| ||| ||||||| |||||||||||||| || |||||| | || Sbjct 145324 CAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGGAGTCCACCCTCCAC 145265 Query 22423 TTAGT 22427 || || Sbjct 145264 TTGGT 145260 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || |||| || ||||| ||| | || Sbjct 145240 ATGCAAATCTTCGTCAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCC 145181 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | |||| ||| |||||||||||||| ||||| ||||| || ||| Sbjct 145180 GATACCATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAA 145121 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| || | || || |||||| | ||||| |||||| Sbjct 145120 CAGCGCCTCATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACAAC 145061 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | ||||| ||| | || | || || ||| Sbjct 145060 ATCCAAAAGGAATCTACGCTTCATTTGGTTCTTCGTCTTCGTGGTGGT 145013 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || | |||||| | ||| || |||| Sbjct 145725 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGTCC 145666 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || ||||| || |||||||| ||| | || || ||||| || Sbjct 145665 AAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAACAGCGTTTGATCTTCGCCGGAAAG 145606 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| |||||| | || ||||||||||| || || || ||||| | ||| Sbjct 145605 CAGCTCGAGGACGGTCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACTCTTCAT 145546 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || | ||||| ||| Sbjct 145545 CTCGTCCTCCGTCTCCGCGGTGGT 145522 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || || |||| | || ||||| | | Sbjct 145012 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAGGTGGAGTCGTCG 144953 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||| |||||||| ||||||||||| ||||| || || Sbjct 144952 GACACCATTGACAACGTCAAGTCAAAGATTCAAGATAAGGAGGGTATCCCACCAGACCAG 144893 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || || ||||| |||||| || || | ||| |||||| Sbjct 144892 CAGAGATTGATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGTACATTGAGCGACTACAAC 144833 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || || || | ||||| || Sbjct 144832 ATCCAGAAGGAGTCTACTCTCCATTTGGT 144804 >seq1523 Length=724860 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | | |||||| | ||| || |||| Sbjct 229957 ACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCGACAATGTCAAGTCC 230016 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || ||||| || || ||||| || || || || ||||| Sbjct 230017 AAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGATCTTCGCTGGCAAG 230076 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | || || ||| ||| |||||||||||||||| ||||| || ||||| Sbjct 230077 CAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGGAGTCCAC 230129 >seq491 Length=357818 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 ||||| || ||| | || || || || |||| ||||| ||||| || ||||||| | Sbjct 80390 TTTGTAAAGACTCTTACGGGAAAGACTATCACCCTTGAGGTGGAGTCCTCCGATACGATC 80331 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || || ||||||||||| ||||| || || || || || | Sbjct 80330 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGATTG 80271 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || | ||||| ||| ||| | || || |||||||| || || Sbjct 80270 ATCTTTGCTGGAAAGCAACTCGAGGACGGCCGTACCCTTTCAGACTACAACATCCAGAA 80212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419717508242815