Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq502 89.7 1e-12 seq476 87.8 4e-12 seq161 87.8 4e-12 >seq502 Length=98925 Score = 89.7 bits (98), Expect = 1e-12 Identities = 278/420 (66%), Gaps = 13/420 (3%) Strand=Plus/Minus Query 294089 CCTTCCCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAG 294148 |||| || ||| ||| ||||| |||||| | ||| |||| | ||| || ||||||| Sbjct 22750 CCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCCTCGAATTCATCGCCGTAGACATCAG 22691 Query 294149 ACAGGCCAGGGCACTCGTGAGGGTCAAGT-AGAGACCACTGGGCATCAGTCTCCACGCGC 294207 ||||| |||||||||| ||| || | |||| ||| | ||| |||| || ||| Sbjct 22690 CTAGGCCTGGGCACTCGTT-GGGACACATCAGAGTCCATTCTCCATTCTTCTCAACACGC 22632 Query 294208 TTCATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCC 294267 |||||||| |||||| | ||||| ||||| || | | || || || | ||| Sbjct 22631 TTCATGAACAGATCAGGAATCCACAAGGCGTAGAAGAGATCACGAGCACGGACTTCTTCC 22572 Query 294268 TCACCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGA 294327 | || ||||| |||||| ||||| || | | |||| || || || || Sbjct 22571 TTGCCGTGATTCTTTCGGAGGTCAAGGAACTCAAACACATCGGCGTGCCATGGCTCGAGG 22512 Query 294328 TACACAGC-AAAGGACCC--CTTCCTGCGTCCCCCCTGGTTGGCGTA---GGCAGATGTG 294381 || | || |||| |||| || || ||| ||||| | | |||| ||| | ||| Sbjct 22511 TAGATGGCGAAAGCACCCGGTCTCTTGTTTCCACCCTGATCGACGTATCTGGC-GGTGTT 22453 Query 294382 GTGTCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATC 294441 || |||||| ||||| || |||||||||| || | || || ||||| ||| Sbjct 22452 GTTGAAAACAC--GAAGCATGGGGACGATGCCATTTGAGTTGCCGTTTGTTCCAGCAATG 22395 Query 294442 TCAGCCCCGCGCCCGCGAATGTCGCT-CATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 | ||| ||| | |||| || ||| | | | || ||||| ||||| ||| |||||| Sbjct 22394 TAAGCACCGGTCGCGCGGAT-TCGGTGGACATTAAGGCCAATTCCACCAGCATTCTTGGA 22336 >seq476 Length=728557 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||||||| ||||| | | Sbjct 288706 TCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATGTTTTCCATGAAGTCGAATGGGTTGGCG 288647 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| | |||||| || | || | ||||| || |||||||| | Sbjct 288646 GACTTGTAGACCTTCTCGTTGCCAAGAGCAAGGAGCAGACGGTCAGCGACAAACTCGATG 288587 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || ||||||||||| | | | ||||||| |||||| | | Sbjct 288586 TACTGCTTCATGAGGGTGGAGTTCATGCCGAGAAGAGCGCAAGGAAGAGCCTCAGTCAAG 288527 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTC 251768 || |||| |||| | |||| ||||| Sbjct 288526 AACTCCTGTTCGATCTCAACAGCCTC 288501 >seq161 Length=388128 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| || || || || ||||| || || ||||| | ||||||| || ||| Sbjct 381904 TCATTGGTGGAAACGGAGCCGGAAAGTCGACACTGATCAAGATGTTGACTGGTGAAACCG 381845 Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 | || | || || ||||||||||||| |||| || | ||| || |||| Sbjct 381844 TCCCAACAGTTGGTCGTGTCGAGAAGCATCCCAACTTGCGTATTGGTTATATCAAGCAGC 381785 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| || | ||| |||| | ||| |||| | ||| ||||||||||| ||||||||| Sbjct 381784 ACGCCCTCGAGCACGTCGAAATGCACTTGGAGAAGACACCTAACCAATATCTTCAGTGGC 381725 Query 280354 GCTATGCAAGTGGGCAGGATC 280374 | || |||| ||| | |||| Sbjct 381724 GTTACGCAAATGGTGATGATC 381704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027809790054891