Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq438 167 6e-36 seq1523 127 5e-24 seq476 102 2e-16 seq502 89.7 1e-12 >seq438 Length=237658 Score = 167 bits (184), Expect = 6e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||||| ||| ||| |||||||| || ||||||| Sbjct 145014 CCACCACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGAC 145073 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | ||| || || |||||||| || |||||||| |||| Sbjct 145074 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGG 145133 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | || ||||| || || | |||| |||||| ||| Sbjct 145134 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACT 145193 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 145194 TCGAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 120 bits (132), Expect = 7e-22 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||||| ||| || || ||||| || || || | Sbjct 145523 CCACCGCGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 145582 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| |||||||||| ||||||||| ||||||| Sbjct 145583 AGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTG---ATCTGGG 145639 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| || | || || || || || | ||| || || Sbjct 145640 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCA 145699 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449 || ||||| ||||| ||||| ||||| Sbjct 145700 ACCTCGAGGGTGATGGTCTTGCCGGT 145725 >seq1523 Length=724860 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | ||| |||||||||| ||| || |||||||| || || |||| Sbjct 230160 TCCTCCACGAAGACGAAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGA 230101 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | ||| || || ||||||||||| || || || ||| Sbjct 230100 GAGGGTTCGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGG 230041 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||| || || |||||||| || | || || || || || | ||| ||| || || Sbjct 230040 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCAC 229981 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| || || || ||||| |||| Sbjct 229980 CTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGA 229943 >seq476 Length=728557 Score = 102 bits (112), Expect = 2e-16 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 269112 CGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCT 269171 |||| | |||||| | ||| ||| | || || || | |||| ||||| || || Sbjct 288515 CGAACAGGAGTTCTTGACTGAGGCTCTTCCTTGCGCTCTTCTCGGCATGAACTCCACCCT 288574 Query 269172 CATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAA 269231 |||||| || || ||||| || || ||||| ||| | || || || || | ||||| Sbjct 288575 CATGAAGCAGTACATCGAGTTTGTCGCTGACCGTCTGCTCCTTGCTCTTGGCAACGAGAA 288634 Query 269232 AGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGAC 269291 || ||||| || || || |||| ||| |||||| || ||||| | || ||||| Sbjct 288635 GGTCTACAAGTCCGCCAACCCATTCGACTTCATGGAAAACATCTCGCTTGCCGGCAAGAC 288694 Query 269292 GAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 ||||||||||| ||||| || ||||||| ||| ||||||| ||| Sbjct 288695 CAACTTCTTCGAGAAGCGCGTTGGCGACTACCAAAAGGCTGGTGTCATG 288743 >seq502 Length=98925 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 348347 CGCCCCATCGGTGTGGGAGTTCAAGGACTTCAGGATGTATTCTTCAAACTGAGATTTTCT 348406 |||||||||| ||| || |||||||| ||| ||||| ||||| || | || || Sbjct 23110 CGCCCCATCGCTGTTGGCGTTCAAGGTCTTGCTGATGTTTTCTTGGCCCTCCGCCTTCCT 23169 Query 348407 TACGACTCACCGGAAGCCAGGGACCTCAACCGCGAAATCTTCGAACATATTTACTATGCC 348466 | |||||| || ||||||| | | || ||| | |||||||| || ||| | || Sbjct 23170 TTCGACTCTCCTGAAGCCAAGCATCTTAACATTCAGATCTTCGAGACCATCTACCACGCT 23229 Query 348467 GCTGTAGAAGCATCGGTAGAACTCGCTGAGATCCATGGTCCTTATCCAACATTCGAAGGG 348526 ||| | | || || || ||||| || | ||||| | ||| || | ||||| Sbjct 23230 GCTCTCACCTCCTCAGTTGAGCTCGCCAAGCTTCATGGCACATATGAGACTTATGAAGGT 23289 Query 348527 TCTCCCGCGAGCAAAGGCATTCTTCAGTACCACTTGTGGGATGTCACTCCTA 348578 || || || ||||||| ||||| ||| || |||||| ||||||||||| Sbjct 23290 TCACCGGCCTCCAAAGGCGAGCTTCAATACGACATGTGGGGTGTCACTCCTA 23341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179623400525578