Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq476 116 8e-21 seq502 89.7 1e-12 seq362 89.7 1e-12 >seq476 Length=728557 Score = 116 bits (128), Expect = 8e-21 Identities = 175/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564 || || || || ||||| | |||| |||| ||| | || ||| |||| ||| ||| Sbjct 288495 ATTACCGAGGCTGTTGAGATCGAACAGGAGTTCTTGACTGAGGCTCTTCCTTGCGCTCTT 288554 Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 | ||||||||||| |||||| ||||||||||| || || || ||||| | || Sbjct 288555 CTCGGCATGAACTCCACCCTCATGAAGCAGTACATCGAGTTTGTCGCTGACCGTCTGCTC 288614 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | || ||||| | ||||| || ||||| ||| ||||| || | ||| ||||| | Sbjct 288615 CTTGCTCTTGGCAACGAGAAGGTCTACAAGTCCGCCAACCCATTCGACTTCATGGAAAAC 288674 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744 || |||||| || || || ||||||||||| ||||| || | || || ||| || Sbjct 288675 ATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAAAAGGCT 288734 Query 243745 GGTGTGATG 243753 ||||| ||| Sbjct 288735 GGTGTCATG 288743 >seq502 Length=98925 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 318797 CGCCCCATCGGTGTTGGAGTTCAAGGACTTCAGGATGTATTCTTCAAACTGAAGCTCCCA 318856 |||||||||| |||||| |||||||| ||| ||||| ||||| || || || Sbjct 23110 CGCCCCATCGCTGTTGGCGTTCAAGGTCTTGCTGATGTTTTCTTGGCCCTCCGCCTTCCT 23169 Query 318857 TTCGACTCATCGGAAGCCAGGGATCTCAACCGCGAAATCTTCGAACATATCTACTACGCC 318916 |||||||| | ||||||| | |||| ||| | |||||||| |||||| |||| Sbjct 23170 TTCGACTCTCCTGAAGCCAAGCATCTTAACATTCAGATCTTCGAGACCATCTACCACGCT 23229 Query 318917 GCTGTAGAAGCATCGATAGAACTCGCTGAGATCCACGGTCCTTATCCAACATTCGAAGGG 318976 ||| | | || | || ||||| || | || || | ||| || | ||||| Sbjct 23230 GCTCTCACCTCCTCAGTTGAGCTCGCCAAGCTTCATGGCACATATGAGACTTATGAAGGT 23289 Query 318977 TCTCCCGCGAGCAAAGGCATCCTGCAGTACCACTTGTGGGATGTCACTCCTA 319028 || || || ||||||| || || ||| || |||||| ||||||||||| Sbjct 23290 TCACCGGCCTCCAAAGGCGAGCTTCAATACGACATGTGGGGTGTCACTCCTA 23341 >seq362 Length=659411 Score = 89.7 bits (98), Expect = 1e-12 Identities = 194/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAA-TCTCGAACC 297489 ||| | ||||||||||| || | ||| || ||| ||||| || |||| ||| ||||| Sbjct 173873 AGTCTGGTGAAAATATAACGAGGACTGGCAGCATCGCTACCA-CCGGCAAGTCTAGAACC 173815 Query 297490 GAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAG 297549 ||| || ||| ||| || |||| || || || ||| | | ||| ||||| Sbjct 173814 GAAAGATCCACTGGGCTCCAAGCAATTGACATTGTTCGAACCAACAAAGTTCTGCGCAAG 173755 Query 297550 GTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAAC 297609 | ||| ||| |||| |||| ||| || || || ||||| ||| ||| | || Sbjct 173754 ACCGATGATAGTCATGTGCATGGATGTTTCACCGTGATGGTAGGCCGTATTCTCAGACAC 173695 Query 297610 GTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATA 297669 |||||| || | | ||||||| || | |||| |||||||| ||| | ||| Sbjct 173694 GTAACCAGCCAATTCAACCACCTTCATATCCTTTGTCAGGTTGCGCTTAAAACAGGCATA 173635 Query 297670 TATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAAT 297717 || ||||| ||||| ||| ||||| ||||| | ||| || ||||| Sbjct 173634 CATGACTTTTCGTTGTCCAGGCTTGAATCCATCGATGACAGAAGGAAT 173587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102851018036850