Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq438 105 7e-18 seq491 86.0 7e-12 >seq438 Length=237658 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | || |||||||| || ||||| || | |||||| || |||| || Sbjct 145032 ACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCG 145091 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| ||||| ||||| ||||| | ||| | | |||||||| || Sbjct 145092 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCT-TG 145150 Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | |||| |||| | | | || ||| |||||| || |||| ||||| || || Sbjct 145151 AATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTT 145210 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || ||||||||||| Sbjct 145211 TCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 102 bits (112), Expect = 9e-17 Identities = 169/239 (71%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 41972 AATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATT 42031 ||| ||| | || || | | ||| | ||||||||| | || |||||| || || || Sbjct 144776 AATCTATTGGCCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTT 144835 Query 42032 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 42091 ||| || || || || | || || | ||||||||||||||| || | || |||||| Sbjct 144836 GTAGTCGCTCAATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTG 144895 Query 42092 GTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCG 42149 ||| | ||| | | |||||| | | ||| | |||| |||| ||| | | | ||||| Sbjct 144896 GTCTGGTGGGATACCCTCCTTAT-CTTGAATCTTTGACTTGA-CGTTGTCAATGGTGTCC 144953 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || | ||||| || ||||| || | ||||| |||||||||||||| Sbjct 144954 GACGACTCCACCTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 >seq491 Length=357818 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || | || || || |||| || || ||||| ||||| || | Sbjct 80210 CCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGA 80269 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | |||||||||||| | || | | |||||||||| ||| || |||| | Sbjct 80270 TCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 80329 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | ||| ||| || ||||| || | ||||| || || ||||| || |||||||||| Sbjct 80330 CGATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAA 80389 Query 42199 AG 42200 || Sbjct 80390 AG 80391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543198873381840