Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq438 118 1e-21 seq1523 96.9 3e-15 >seq438 Length=237658 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||||| ||| ||||| ||||| |||||||| || | | ||||| |||| Sbjct 145028 AAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTC 145087 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || ||||||||||| | ||||| ||||| ||||| || || || ||||| || || Sbjct 145088 TTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTC 145147 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || ||| ||| || || | ||||| | || ||||| | || | || Sbjct 145148 TTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGT 145207 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| ||||||| || || ||||| |||||||| Sbjct 145208 CTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || |||||||||||||| || | || ||| || | |||||||| ||||| || Sbjct 145272 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCTTCAAGTTGCTTTCCA 145331 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || || || || |||||||| ||||| || ||||| || || ||| Sbjct 145332 GCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTGCTCTTG 145391 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| || || ||||| | ||| | |||||||||||| | || Sbjct 145392 ACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 145451 Query 64427 TTTACGA 64433 || |||| Sbjct 145452 TTGACGA 145458 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||||| || || || || || ||||||||||| | Sbjct 145522 ACCACCGCGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 145581 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || |||||||| ||||| | || | ||||| || || || || Sbjct 145582 AAGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGG 145641 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| ||| || | |||||| || || || Sbjct 145642 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCAAC 145701 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | || | |||||||||||| Sbjct 145702 CTCGAGGGTGATGGTCTTGCCGGT 145725 >seq1523 Length=724860 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || || || ||||| ||||||||||| | || ||| || |||| Sbjct 230145 AAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTC 230086 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || |||||||| || | || || || |||||||| || || ||||| || || || Sbjct 230085 TTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTC 230026 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | |||||| | ||||| || | || | || Sbjct 230025 CTGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTCGAGGGTGATAGT 229966 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||| || | || || |||| Sbjct 229965 CTTGCCCGTGAGGGTCTTCACGA 229943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499631990356440