Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq502 217 1e-51 >seq502 Length=98925 Score = 217 bits (240), Expect = 1e-51 Identities = 607/927 (65%), Gaps = 22/927 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| || || ||| || ||||||||| | |||||| Sbjct 22036 AACTACCAATACTTCGGCTTCAAGACCCTCGAGCGTTCATACCTCCTCCGTCTCGATGGC 22095 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | | |||||| || || || || | ||||| |||||| |||| |||||||| | Sbjct 22096 AAGATCTGCGAGCGTCCACAACACATGATCATGCGGGTCGCCGTCGGCATTCACGGAGAG 22155 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || || | || | | | | || ||| | ||| | | || |||| | Sbjct 22156 GATATCGAGTCTGCGATCGAGACCTACAACCTGATGTCCCAGAAGTGCTTCACACATG-C 22214 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 |||||||||| ||| || || || || |||| | ||||| || |||||||| Sbjct 22215 TTCCCCGACCCTCTTCGCTGCTGGCACACCACAAGCACAACTCTCTTCCTGCTTCCTGAT 22274 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||||||||| ||| || | ||||| | ||| ||||| | | Sbjct 22275 TGAC-ATGAAGGAGGACTCCATCGACGGTATCTACGACACATTGAAGACATGTGCTATGA 22333 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | || || | || || ||||| || | | ||||||| | || || | ||| | | Sbjct 22334 TTTCCAAGAATGCTGGTGGAATTGGCCTTAATGTCCACCGAATCCGCGCGACCGGTGCTT 22393 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| || || || |||| ||| || ||| ||||||| ||||| || || ||||||| Sbjct 22394 ACATTGCTGGAACAAACGGCAACTCAAATGGCATCGTCCCCATGCTTCGTGTTTTCAACA 22453 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| || |||||||| | ||| |||| ||||||| |||| | Sbjct 22454 ACACCGCCAGATACGTCGATCAGGGTGGAAACAAGAGACCGGGTGCTTTCGCCATCTACC 22513 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||| || ||| | ||| | ||||| |||||||| |||||||| | Sbjct 22514 TCGAGCCATGGCACGCCGATGTGTTTGAGTTCCTTGACCTCCGAAAGAATCACGGCAAGG 22573 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | || ||||||||||| | ||| | || || || || ||||| | Sbjct 22574 AAGAAGTCCGTGCTCGTGATCTCTTCTACGCCTTGTGGATTCCTGATCTGTTCATGAAGC 22633 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| || | |||| ||| | |||||||| || || || || || | | Sbjct 22634 GTGTTGAGAAGAATGGAGAATGGACTCTGATGTGTCCCAACGAGTGCCCAGGCCTAGCTG 22693 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA--------ATCG-CAGG 94423 | || | || || || || | |||| |||||| | || | | Sbjct 22694 ATGTCTACGG---------CGATGAATTCGAGGCTCTTTACGAGAAGTACGAGCGTGAAG 22744 Query 94424 GCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 | |||| | || || | ||| |||||| ||| || || |||| | |||| Sbjct 22745 GAAAGGGTCGCAAAACCATCAAGGCTCAGAAGCTCTGGTATTCCATTCTGGAGGCACAGA 22804 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 ||||| || | || | ||| |||| |||||| || |||| || ||||||| Sbjct 22805 CTGAGACCGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACAGAAAAAGCAACCAGA 22864 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 || |||| || || ||||| || || || |||||||| ||||||||| | ||| Sbjct 22865 AGAACCTGGGTACCATTCGCAGCTCCAACCTCTGTACCGAGATCGTCGAGTATTGTGCTC 22924 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGG 94630 | || ||| |||| || || ||| ||| Sbjct 22925 CAGATGAGGTTGCAGTCTGCAACTTGG 22951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494710516533960