Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq438 105 5e-18 seq1523 84.2 2e-11 >seq438 Length=237658 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| |||||||| ||||| || ||||| |||||||| ||| ||| | | ||||||| Sbjct 145031 AACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTC 145090 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||| ||||| ||| | || | ||||||||||| ||| || ||||||||||| Sbjct 145091 GAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTG 145150 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || || | || || |||||| ||| || || | ||| || || || Sbjct 145151 AATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTT 145210 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| || || || || ||||||||| Sbjct 145211 TCCGGTCAGGGTCTTGACGAAGATTTGCATA 145241 Score = 82.4 bits (90), Expect = 5e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || ||||| |||||||| ||| ||| ||| | ||||| Sbjct 145260 ACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCTTCA 145319 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | || | ||| ||||| || ||||| ||||||||||| | Sbjct 145320 AGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 145379 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCG 15117 || ||||| || || | || || |||||| Sbjct 145380 ATCTTGCTCTTGACGTTGTCGATCGTATCG 145409 >seq1523 Length=724860 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || ||||| |||||||||||| ||| ||| ||||||| | ||| Sbjct 230136 ATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCTTCGAGTTG 230077 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | |||| || || ||||| ||| ||||| |||||||| || || Sbjct 230076 CTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT 230017 Query 15093 GCTTTTTACAATTTCTATAGTATC 15116 | || ||| | || || ||||| Sbjct 230016 GGACTTGACATTGTCGATGGTATC 229993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357383066428535