Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq476 98.7 9e-16 seq438 86.0 6e-12 >seq476 Length=728557 Score = 98.7 bits (108), Expect = 9e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 47437 AGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACC 47496 |||||||||| |||||||| ||||| |||||| || || | ||| | ||| Sbjct 288583 AGTACATCGAGTTTGTCGCTGACCGTCTGCTCCTTGCTCTTGGCAACGAGAAGGTCTACA 288642 Query 47497 ACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTT 47556 | ||| || |||||||| || ||| | ||||| ||||| | |||||||||||||| | Sbjct 288643 AGTCCGCCAACCCATTCGACTTCATGGAAAACATCTCGCTTGCCGGCAAGACCAACTTCT 288702 Query 47557 TCGAGAAGCGCGTCGGCGAATA 47578 ||||||||||||| ||||| || Sbjct 288703 TCGAGAAGCGCGTTGGCGACTA 288724 >seq438 Length=237658 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| |||||||| ||||| ||| Sbjct 145242 CCACCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAG 145301 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || ||||||||| |||| | || || ||||| ||||| Sbjct 145302 AGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 145361 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||||| ||||| ||| || || | |||||| Sbjct 145362 ATACCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGT-CGATCGTATCGGAGGACTCGAC 145420 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 ||||| || | || |||||||| || || || || Sbjct 145421 TTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 145456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475488609348240