Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq438 125 8e-24 seq1523 109 6e-19 seq491 104 3e-17 >seq438 Length=237658 Score = 125 bits (138), Expect = 8e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | ||| ||||||||||| ||||||||||| |||||||| |||| ||| Sbjct 145032 ACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCG 145091 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | |||||| ||||| | || | | |||||||| Sbjct 145092 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGA 145151 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | || ||| |||||| || || | ||||| || || Sbjct 145152 ATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTT 145211 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || ||||||||||| Sbjct 145212 CCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 109 bits (120), Expect = 6e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| ||| || | | ||| | ||||| ||| | ||| |||||| ||||| |||||| Sbjct 144780 TATTGGCCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAG 144839 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 ||| | || || | || || | |||||| || ||||| ||||| | ||||||||| Sbjct 144840 TCGCTCAATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCT 144899 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGA 46539 | || | | |||||| || ||||| ||||| ||| | || | |||| ||| Sbjct 144900 GGTGGGATACCCTCCTTATCTTGAATCTTTGACTTGA-CGTTGTCAATGGTGTCCGACGA 144958 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| ||||| || ||||| |||| || || |||||||||||||| Sbjct 144959 CTCCACCTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || ||||| |||| ||||||||||| |||||||| Sbjct 145558 CTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAA 145617 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 ||||| ||||| || || | || | || ||||||||| |||||| ||||| Sbjct 145618 GATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGA 145673 >seq1523 Length=724860 Score = 109 bits (120), Expect = 6e-19 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| ||||| || || || |||| ||||| |||||||| ||||| Sbjct 230124 CTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCAGCGAA 230065 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||| |||||||| | || | | |||||||||| |||||| ||||| | Sbjct 230064 GATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 230005 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || ||| ||||| || | ||||| || |||||||| || || || || Sbjct 230004 GTCGATGGTATCAGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 229945 >seq491 Length=357818 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || || || || |||| ||||| ||||| || || || | Sbjct 80210 CCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGA 80269 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 80270 TCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 80329 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||| ||| || ||||| || | ||||| || || ||||| || || || |||| Sbjct 80330 CGATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAA 80389 Query 46584 AG 46585 || Sbjct 80390 AG 80391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565223908700520