Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq491 102 3e-16 seq438 102 3e-16 >seq491 Length=357818 Score = 102 bits (112), Expect = 3e-16 Identities = 187/274 (68%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || ||||| || || ||||| ||| | || | ||||| || || ||||| || || ||| Sbjct 294104 ACCGTTCCAGCCTACTTCAACGATTCCCAGAGACAAGCCACCAAGGATGCCGGTCAGATT 294163 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 || ||| | || ||||| || || | || || ||||| || ||||| || || || || Sbjct 294164 GCGGGTCTCAACGTTCTCCGTGTTGTCAACGAGCCTACCGCTGCTGCCCTTGCTTACGGC 294223 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 |||| | ||| | || || || | |||| || | ||| ||||||||||| Sbjct 294224 CTAG-------AGAAGGATGAG--GACAAGATTATTGCTGTCTACGATCTTGGTGGAGGA 294274 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || |||| || || ||| || | | || || ||||| || ||| | |||||| Sbjct 294275 ACCTTCGATATCTCAGTCCTTGAGATCCAGAAGGGTGTCTTTGAGGTCAAGTCTACCAAT 294334 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 |||||||| || | || ||||| ||| | |||| Sbjct 294335 GGTGATACCCACTTGGGTGGTGAGGATTTCGATA 294368 >seq438 Length=237658 Score = 102 bits (112), Expect = 3e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || || || || || || || ||||| || || || || || |||| || | Sbjct 145458 TCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCG 145399 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | || || |||||||| |||||||| |||||||| |||||||||||| | | Sbjct 145398 ACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTA 145339 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 | ||| | || || |||||||||||||| |||| | | || || || ||| | |||| Sbjct 145338 TCTTCGCTGGAAAGCAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGG 145279 Query 391240 ATGCAACACTTCACTTAGT 391258 | | || || ||||| || Sbjct 145278 AGTCCACCCTCCACTTGGT 145260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975666481207508