Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1370 102 6e-16 >seq1370 Length=616207 Score = 102 bits (112), Expect = 6e-16 Identities = 187/274 (68%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || || ||||| ||||| ||||| | |||| || | |||| | || | ||| | Sbjct 108076 TTGTCGAAATCCTCACCACCCAAGTGGGTATCACCGGCGGTAGACTTAACCTCGAAGATA 108017 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || |||| | |||||| | ||||| |||||| ||||| | ||| || || || Sbjct 108016 CCCTCCTCAATGGTCAAAAGGGAGACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGA 107957 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 || || || || || || || ||||| || |||| ||| || || || || Sbjct 107956 ACGTTGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAAGCAATAGCGGCGGCGGTGGGC 107897 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || || || || | | ||| || ||||||||||| || ||||| || |||||||| Sbjct 107896 TCGTTGATGATACGGAGAACGTTGAGACCAGCAATCAAACCAGCATCCTTGGTGGCTTGA 107837 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297 | |||||||||| | || ||||| || || |||| Sbjct 107836 CGTTGTGAATCGGTGAAGTATGCTGGGACTGTAA 107803 Score = 96.9 bits (106), Expect = 3e-14 Identities = 253/384 (66%), Gaps = 3/384 (1%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| || || | || || |||||||| | ||| || ||||| || ||||| ||||| Sbjct 108918 GGCAGAAACGTTCATGATTCCGTTGGCATCAAGATCGAAGGTGACCTCGATTTGTGGGAC 108859 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 || | | ||||||||||| || | | || | |||| | || || || || Sbjct 108858 ACCACGAGGTGCAGGTGGGATACCAGTGAGCTCGAACTTGCCCAAAAGGTTGTTGTCCTT 108799 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 ||| || || ||||||||||| | ||||||| || ||| |||||| || || | Sbjct 108798 GGTGCGTTGACGCTCACCCTCGAAGACTTGGATAAGCACACCAGGTTGATTGTCGGAGAA 108739 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || | || || ||| || || || || || ||||| | ||| | ||||| Sbjct 108738 GGTGGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGAATGAGCTTGGT 108679 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| ||||| || || || | ||||||||| | || | ||||| | |||| || Sbjct 108678 CATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCAACATCGAGAAGGAGGAT 108619 Query 517558 AT--TTTGAAGTTTTTCAT-CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | || | | || || ||| | |||| ||||| || || || | |||||||| Sbjct 108618 TTCGTTGGTGGACTTGGATGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACC 108559 Query 517615 ATATGCAACAGCTTCATCAGGATT 517638 || || ||||| |||||||| || Sbjct 108558 GTAGGCGACAGCCTCATCAGGGTT 108535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780720622624006