Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq772 105 8e-18 >seq772 Length=71917 Score = 105 bits (116), Expect = 8e-18 Identities = 172/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 153772 GGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACA 153831 ||||||| | || | || | || || |||||||| || ||||| || || || Sbjct 53676 GGTTTGGAGTGCCATTTGGCTTCGGTGGACCTCATGCCGCCTTCTTCGCTGTAAGCGATC 53735 Query 153832 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTC--AGTAGATAGTGAAGGTAA 153889 |||| ||| |||| || |||||| | | |||| || || | | | || || | Sbjct 53736 AGTACAAGCGAAAAATTCCTGGCCGCTTGATAGGAGTATCGAAGGACAGATTGGGGG--A 53793 Query 153890 TAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAAC 153949 |||||| ||||| ||||| |||||| |||||||||||||| | | || || || || Sbjct 53794 CAAAGCAATGAGATTGGCACTCCAGACTCGAGAGCAGCATATCCGTCGTGAAAAGGCGAC 53853 Query 153950 CAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATA 154009 ||||| | |||||||| |||||| || | || || ||| || |||||||||| || Sbjct 53854 AAGTAATGTATGCACAGCACAGGCATTGTTAGCCAACATGAGTGCTTTCTATGCAGTCTA 53913 Query 154010 TCATGG 154015 |||||| Sbjct 53914 TCATGG 53919 Score = 89.7 bits (98), Expect = 6e-13 Identities = 164/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACAT--GGTGTATTTGAAACTAACATTA-GACAGATA 154928 |||||||| || ||||| | ||||| || || || || || | |||| | | | | Sbjct 54851 ATTATGATAACGTACCC--CAGCACATTCGGAGTGTTCGAGCCTGAGATTAAGGCTGTT- 54907 Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 ||| | | |||||| | |||| || ||||| || | || || || || | |||||| Sbjct 54908 TGTGACCTTGTTCATCAGCATGGCGGGCAGGTTTACATGGACGGTGCCAACATGAATGCA 54967 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 ||| | || || || | ||| || |||||||| ||||| | ||| | ||| Sbjct 54968 CAGATTGGTTTATGCTCTCCTGGAGAGATCGGAGCAGATGTCTGTCACTTGAACCTGCAT 55027 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || || ||||||||||| || || ||||||||||| || || ||||| || ||||| Sbjct 55028 AAGACTTTCTGTATTCCTCACGGCGGTGGAGGTCCAGGTGTTGGTCCAATCGGTGT 55083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579197950431840