Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq772 107 2e-18 >seq772 Length=71917 Score = 107 bits (118), Expect = 2e-18 Identities = 170/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 158447 GGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACA 158506 ||||||| | || | || | ||| || |||||||| || ||||| || || || Sbjct 53676 GGTTTGGAGTGCCATTTGGCTTCGGTGGACCTCATGCCGCCTTCTTCGCTGTAAGCGATC 53735 Query 158507 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATA 158566 |||| ||| |||| || |||||| | | |||| || || || || | | Sbjct 53736 AGTACAAGCGAAAAATTCCTGGCCGCTTGATAGGAGTATCGAAGGACAGATTGGGGGACA 53795 Query 158567 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCA 158626 ||||| ||||| ||||| |||||| |||||||||||||| | | || || || || | Sbjct 53796 AAGCAATGAGATTGGCACTCCAGACTCGAGAGCAGCATATCCGTCGTGAAAAGGCGACAA 53855 Query 158627 GTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATC 158686 |||| | ||||||||||| ||| || | || || ||| || |||||||||| |||| Sbjct 53856 GTAATGTATGCACAGCACAGGCATTGTTAGCCAACATGAGTGCTTTCTATGCAGTCTATC 53915 Query 158687 ATGG 158690 |||| Sbjct 53916 ATGG 53919 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 159611 TTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAG 159670 |||||||| || |||| || ||||| || | || ||||| || | ||||||||| | | Sbjct 54915 TTGTTCATCAGCATGGCGGGCAGGTTTACATGGACGGTGCCAACATGAATGCACAGATTG 54974 Query 159671 GTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730 || || || | || || |||||||| ||||| | ||| | |||||||| | Sbjct 54975 GTTTATGCTCTCCTGGAGAGATCGGAGCAGATGTCTGTCACTTGAACCTGCATAAGACTT 55034 Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||||| || || ||||||||||| || || ||||| || ||||| Sbjct 55035 TCTGTATTCCTCACGGCGGTGGAGGTCCAGGTGTTGGTCCAATCGGTGT 55083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588036123837360